RNA–Protein interactions for RNA: ENST00000532406.1

KNL1-210, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-210ENST00000532406 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
KNL1-210ENST00000532406 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
KNL1-210ENST00000532406 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
KNL1-210ENST00000532406 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
KNL1-210ENST00000532406 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
KNL1-210ENST00000532406 FOXD1Q16676 465 aa13.95□□□□□ -0.18
KNL1-210ENST00000532406 ADRA2BP18089 450 aa13.83□□□□□ -0.2
KNL1-210ENST00000532406 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
KNL1-210ENST00000532406 KCNA4P22459 653 aa13.37□□□□□ -0.27
KNL1-210ENST00000532406 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
KNL1-210ENST00000532406 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
KNL1-210ENST00000532406 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
KNL1-210ENST00000532406 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
KNL1-210ENST00000532406 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
KNL1-210ENST00000532406 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
KNL1-210ENST00000532406 MSH5O43196 834 aa12.71□□□□□ -0.37
KNL1-210ENST00000532406 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
KNL1-210ENST00000532406 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
KNL1-210ENST00000532406 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
KNL1-210ENST00000532406 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
KNL1-210ENST00000532406 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
KNL1-210ENST00000532406 ZBTB22O15209 634 aa12.33□□□□□ -0.44
KNL1-210ENST00000532406 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
KNL1-210ENST00000532406 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
KNL1-210ENST00000532406 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
KNL1-210ENST00000532406 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
KNL1-210ENST00000532406 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
KNL1-210ENST00000532406 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
KNL1-210ENST00000532406 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
KNL1-210ENST00000532406 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
KNL1-210ENST00000532406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.57
KNL1-210ENST00000532406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
KNL1-210ENST00000532406 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
KNL1-210ENST00000532406 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
KNL1-210ENST00000532406 FKBP8Q14318 412 aa11.39□□□□□ -0.59
KNL1-210ENST00000532406 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
KNL1-210ENST00000532406 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
KNL1-210ENST00000532406 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
KNL1-210ENST00000532406 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
KNL1-210ENST00000532406 APLP2Q06481 763 aa11.22□□□□□ -0.61
KNL1-210ENST00000532406 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
KNL1-210ENST00000532406 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
KNL1-210ENST00000532406 POTEDQ86YR6 584 aa10.98□□□□□ -0.65
KNL1-210ENST00000532406 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
KNL1-210ENST00000532406 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
KNL1-210ENST00000532406 SPDYE4A6NLX3 237 aa10.92□□□□□ -0.66
KNL1-210ENST00000532406 PROM2Q8N271 834 aa10.91□□□□□ -0.66
KNL1-210ENST00000532406 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
KNL1-210ENST00000532406 FBLN2P98095 1184 aa10.89□□□□□ -0.67
KNL1-210ENST00000532406 SPINK5Q9NQ38 1064 aaPredicted RBP10.89□□□□□ -0.67
KNL1-210ENST00000532406 TRHP20396 242 aaPredicted RBP10.86□□□□□ -0.67
KNL1-210ENST00000532406 C1QBPQ07021 282 aaKnown RBP10.85□□□□□ -0.67
KNL1-210ENST00000532406 POLA2Q14181 598 aa10.84□□□□□ -0.67
KNL1-210ENST00000532406 CAPN15O75808 1086 aa10.81□□□□□ -0.68
KNL1-210ENST00000532406 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
KNL1-210ENST00000532406 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
KNL1-210ENST00000532406 ABCB7O75027 752 aa10.63□□□□□ -0.71
KNL1-210ENST00000532406 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
KNL1-210ENST00000532406 DSG3P32926 999 aa10.56□□□□□ -0.72
KNL1-210ENST00000532406 SPDYE2BA6NHP3 402 aa10.51□□□□□ -0.73
KNL1-210ENST00000532406 SPDYE6P0CI01 402 aa10.51□□□□□ -0.73
KNL1-210ENST00000532406 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
KNL1-210ENST00000532406 ZNF692Q9BU19 519 aaPredicted RBP10.49□□□□□ -0.73
KNL1-210ENST00000532406 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
KNL1-210ENST00000532406 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
KNL1-210ENST00000532406 PKD2Q13563 968 aa10.45□□□□□ -0.74
KNL1-210ENST00000532406 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
KNL1-210ENST00000532406 PLCB2Q00722 1185 aa10.44□□□□□ -0.74
KNL1-210ENST00000532406 SPOCK2Q92563 424 aa10.4□□□□□ -0.74
KNL1-210ENST00000532406 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
KNL1-210ENST00000532406 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
KNL1-210ENST00000532406 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
KNL1-210ENST00000532406 DCAF8L2P0C7V8 631 aa10.32□□□□□ -0.76
KNL1-210ENST00000532406 MIER1Q8N108 512 aa10.28□□□□□ -0.76
KNL1-210ENST00000532406 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
KNL1-210ENST00000532406 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
KNL1-210ENST00000532406 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
KNL1-210ENST00000532406 CACNB1Q02641 598 aaPredicted RBP10.22□□□□□ -0.77
KNL1-210ENST00000532406 HAP1P54257 671 aaPredicted RBP10.21□□□□□ -0.77
KNL1-210ENST00000532406 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
KNL1-210ENST00000532406 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
KNL1-210ENST00000532406 RGL2O15211 777 aa10.16□□□□□ -0.78
KNL1-210ENST00000532406 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
KNL1-210ENST00000532406 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
KNL1-210ENST00000532406 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
KNL1-210ENST00000532406 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
KNL1-210ENST00000532406 RBM42Q9BTD8 480 aaKnown RBP10.08□□□□□ -0.8
KNL1-210ENST00000532406 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
KNL1-210ENST00000532406 SPDYE1Q8NFV5 336 aaPredicted RBP10.06□□□□□ -0.8
KNL1-210ENST00000532406 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
KNL1-210ENST00000532406 BCANQ96GW7 911 aa10.05□□□□□ -0.8
KNL1-210ENST00000532406 GSE1Q14687 1217 aa10.04□□□□□ -0.8
KNL1-210ENST00000532406 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
KNL1-210ENST00000532406 NUBP1P53384 320 aa10.01□□□□□ -0.81
KNL1-210ENST00000532406 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
KNL1-210ENST00000532406 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
KNL1-210ENST00000532406 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
KNL1-210ENST00000532406 DNAJC5Q9H3Z4 198 aa9.98□□□□□ -0.81
KNL1-210ENST00000532406 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
KNL1-210ENST00000532406 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms