RNA–Protein interactions for RNA: ENST00000532067.1

ATG13-219, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-219ENST00000532067 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
ATG13-219ENST00000532067 CHIC1Q5VXU3 224 aa12.55□□□□□ -0.4
ATG13-219ENST00000532067 SENP3Q9H4L4 574 aaPredicted RBP11.48□□□□□ -0.57
ATG13-219ENST00000532067 PHF23Q9BUL5 403 aaPredicted RBP11.25□□□□□ -0.61
ATG13-219ENST00000532067 FOXD1Q16676 465 aa10.64□□□□□ -0.71
ATG13-219ENST00000532067 MSH5O43196 834 aa10.11□□□□□ -0.79
ATG13-219ENST00000532067 POTEDQ86YR6 584 aa10.06□□□□□ -0.8
ATG13-219ENST00000532067 PLPPR3Q6T4P5 718 aa9.99□□□□□ -0.81
ATG13-219ENST00000532067 PIAS4Q8N2W9 510 aaPredicted RBP9.95□□□□□ -0.82
ATG13-219ENST00000532067 PPP6R1Q9UPN7 881 aa9.78□□□□□ -0.84
ATG13-219ENST00000532067 ADRA2BP18089 450 aa9.76□□□□□ -0.85
ATG13-219ENST00000532067 SCAF1Q9H7N4 1312 aaKnown RBP9.07□□□□□ -0.96
ATG13-219ENST00000532067 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
ATG13-219ENST00000532067 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
ATG13-219ENST00000532067 CACNB1Q02641 598 aaPredicted RBP8.75□□□□□ -1.01
ATG13-219ENST00000532067 DCAF8L1A6NGE4 600 aa8.71□□□□□ -1.02
ATG13-219ENST00000532067 PPP4R3CPQ6ZMV5 832 aa8.69□□□□□ -1.02
ATG13-219ENST00000532067 HOXD11P31277 338 aaPredicted RBP8.64□□□□□ -1.03
ATG13-219ENST00000532067 CNKSR2Q8WXI2 1034 aa8.6□□□□□ -1.03
ATG13-219ENST00000532067 RNF39Q9H2S5 420 aa8.56□□□□□ -1.04
ATG13-219ENST00000532067 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
ATG13-219ENST00000532067 C1QBPQ07021 282 aaKnown RBP8.47□□□□□ -1.05
ATG13-219ENST00000532067 DNAJC5BQ9UF47 199 aa8.43□□□□□ -1.06
ATG13-219ENST00000532067 NCBP3Q53F19 620 aaKnown RBP8.38□□□□□ -1.07
ATG13-219ENST00000532067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.27□□□□□ -1.09
ATG13-219ENST00000532067 NPM3O75607 178 aaKnown RBP8.17□□□□□ -1.1
ATG13-219ENST00000532067 U3KPZ7 1027 aaPredicted RBP8.02□□□□□ -1.13
ATG13-219ENST00000532067 CAPN15O75808 1086 aa8□□□□□ -1.13
ATG13-219ENST00000532067 DSG3P32926 999 aa7.95□□□□□ -1.14
ATG13-219ENST00000532067 SPINK5Q9NQ38 1064 aaPredicted RBP7.94□□□□□ -1.14
ATG13-219ENST00000532067 APLP2Q06481 763 aa7.93□□□□□ -1.14
ATG13-219ENST00000532067 POTEHQ6S545 545 aa7.88□□□□□ -1.15
ATG13-219ENST00000532067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.86□□□□□ -1.15
ATG13-219ENST00000532067 HNRNPUL2Q1KMD3 747 aaKnown RBP7.86□□□□□ -1.15
ATG13-219ENST00000532067 KCNA4P22459 653 aa7.85□□□□□ -1.15
ATG13-219ENST00000532067 ZNF219Q9P2Y4 722 aaPredicted RBP7.85□□□□□ -1.15
ATG13-219ENST00000532067 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
ATG13-219ENST00000532067 TRHP20396 242 aaPredicted RBP7.81□□□□□ -1.16
ATG13-219ENST00000532067 SAMD1Q6SPF0 538 aaPredicted RBP7.78□□□□□ -1.16
ATG13-219ENST00000532067 ABCB7O75027 752 aa7.75□□□□□ -1.17
ATG13-219ENST00000532067 RBM42Q9BTD8 480 aaKnown RBP7.69□□□□□ -1.18
ATG13-219ENST00000532067 MYCNP04198 464 aaPredicted RBP7.62□□□□□ -1.19
ATG13-219ENST00000532067 POLA2Q14181 598 aa7.57□□□□□ -1.2
ATG13-219ENST00000532067 CHRDL2Q6WN34 429 aa7.52□□□□□ -1.21
ATG13-219ENST00000532067 ZBTB12Q9Y330 459 aaPredicted RBP7.49□□□□□ -1.21
ATG13-219ENST00000532067 FOXD4L1Q9NU39 408 aa7.44□□□□□ -1.22
ATG13-219ENST00000532067 AKT1S1Q96B36 256 aa7.43□□□□□ -1.22
ATG13-219ENST00000532067 SLC4A1APQ9BWU0 796 aaKnown RBP7.43□□□□□ -1.22
ATG13-219ENST00000532067 ATF5Q9Y2D1 282 aaPredicted RBP7.35□□□□□ -1.23
ATG13-219ENST00000532067 REM2Q8IYK8 340 aaPredicted RBP7.32□□□□□ -1.24
ATG13-219ENST00000532067 OSCARQ8IYS5 282 aa7.32□□□□□ -1.24
ATG13-219ENST00000532067 SP7Q8TDD2 431 aaPredicted RBP7.32□□□□□ -1.24
ATG13-219ENST00000532067 PIP4P2Q8N4L2 257 aa7.27□□□□□ -1.25
ATG13-219ENST00000532067 ATXN8OSP0DMR3 200 aa7.25□□□□□ -1.25
ATG13-219ENST00000532067 PITPNM1O00562 1244 aa7.24□□□□□ -1.25
ATG13-219ENST00000532067 HAX1O00165 279 aa7.23□□□□□ -1.25
ATG13-219ENST00000532067 FXR2P51116 673 aaKnown RBP eCLIP7.21□□□□□ -1.26
ATG13-219ENST00000532067 FBLN2P98095 1184 aa7.21□□□□□ -1.26
ATG13-219ENST00000532067 SPDYE2BA6NHP3 402 aa7.19□□□□□ -1.26
ATG13-219ENST00000532067 SPDYE6P0CI01 402 aa7.19□□□□□ -1.26
ATG13-219ENST00000532067 SPDYE2Q495Y8 402 aa7.19□□□□□ -1.26
ATG13-219ENST00000532067 ZBTB22O15209 634 aa7.18□□□□□ -1.26
ATG13-219ENST00000532067 SPDYE1Q8NFV5 336 aaPredicted RBP7.12□□□□□ -1.27
ATG13-219ENST00000532067 CLEC11AQ9Y240 323 aa7.09□□□□□ -1.27
ATG13-219ENST00000532067 PRKAR2AP13861 404 aaKnown RBP7.07□□□□□ -1.28
ATG13-219ENST00000532067 ZNF692Q9BU19 519 aaPredicted RBP7.07□□□□□ -1.28
ATG13-219ENST00000532067 SSUH2Q9Y2M2 353 aa7.04□□□□□ -1.28
ATG13-219ENST00000532067 EVX2Q03828 476 aa7.03□□□□□ -1.28
ATG13-219ENST00000532067 MKRN4PQ13434 485 aaPredicted RBP7.02□□□□□ -1.29
ATG13-219ENST00000532067 C19orf67A6NJJ6 358 aa6.98□□□□□ -1.29
ATG13-219ENST00000532067 PRR29P0C7W0 189 aa6.96□□□□□ -1.3
ATG13-219ENST00000532067 PABPN1Q86U42 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATG13-219ENST00000532067 GABBR2O75899 941 aa6.92□□□□□ -1.3
ATG13-219ENST00000532067 CHADLQ6NUI6 762 aa6.91□□□□□ -1.3
ATG13-219ENST00000532067 CLCN6P51797 869 aa6.88□□□□□ -1.31
ATG13-219ENST00000532067 LHX8Q68G74 356 aa6.86□□□□□ -1.31
ATG13-219ENST00000532067 CD44P16070 742 aaKnown RBP6.85□□□□□ -1.31
ATG13-219ENST00000532067 FARP1Q9Y4F1 1045 aaPredicted RBP6.84□□□□□ -1.31
ATG13-219ENST00000532067 STAG3Q9UJ98 1225 aa6.79□□□□□ -1.32
ATG13-219ENST00000532067 DCBLD2Q96PD2 775 aa6.76□□□□□ -1.33
ATG13-219ENST00000532067 ZNF579Q8NAF0 562 aaKnown RBP6.73□□□□□ -1.33
ATG13-219ENST00000532067 CSRNP3Q8WYN3 585 aa6.73□□□□□ -1.33
ATG13-219ENST00000532067 POTEIP0CG38 1075 aa6.72□□□□□ -1.33
ATG13-219ENST00000532067 ZRANB1Q9UGI0 708 aa6.72□□□□□ -1.33
ATG13-219ENST00000532067 PAK3O75914 559 aaPredicted RBP6.71□□□□□ -1.34
ATG13-219ENST00000532067 CREBZFQ9NS37 354 aa6.69□□□□□ -1.34
ATG13-219ENST00000532067 SPDYE4A6NLX3 237 aa6.67□□□□□ -1.34
ATG13-219ENST00000532067 NPM1P06748 294 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATG13-219ENST00000532067 GALR2O43603 387 aaPredicted RBP6.62□□□□□ -1.35
ATG13-219ENST00000532067 EHMT2Q96KQ7 1210 aa6.61□□□□□ -1.35
ATG13-219ENST00000532067 PHF12Q96QT6 1004 aa6.58□□□□□ -1.36
ATG13-219ENST00000532067 PLSCR2Q9NRY7 297 aa6.56□□□□□ -1.36
ATG13-219ENST00000532067 MNX1P50219 401 aaPredicted RBP6.54□□□□□ -1.36
ATG13-219ENST00000532067 OTUD5Q96G74 571 aa6.54□□□□□ -1.36
ATG13-219ENST00000532067 C7P10643 843 aa6.51□□□□□ -1.37
ATG13-219ENST00000532067 ASTLQ6HA08 431 aaPredicted RBP6.51□□□□□ -1.37
ATG13-219ENST00000532067 SLC39A7Q92504 469 aa6.51□□□□□ -1.37
ATG13-219ENST00000532067 PLEKHG5O94827 1062 aa6.5□□□□□ -1.37
ATG13-219ENST00000532067 METRNQ9UJH8 293 aa6.5□□□□□ -1.37
ATG13-219ENST00000532067 POTEB2H3BUK9 544 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms