RNA–Protein interactions for RNA: ENST00000531626.2

KNL1-207, Transcript of kinetochore scaffold 1, humanhuman

TSL 5

Gene KNL1, Length 669 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-207ENST00000531626 AEBP2Q6ZN18 517 aaPredicted RBP33.33■■■□□ 2.93
KNL1-207ENST00000531626 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
KNL1-207ENST00000531626 SENP3Q9H4L4 574 aaPredicted RBP28.61■■■□□ 2.17
KNL1-207ENST00000531626 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
KNL1-207ENST00000531626 FOXD1Q16676 465 aa26.61■■□□□ 1.85
KNL1-207ENST00000531626 MSH5O43196 834 aa25.13■■□□□ 1.61
KNL1-207ENST00000531626 PLPPR3Q6T4P5 718 aa25.02■■□□□ 1.6
KNL1-207ENST00000531626 POTEDQ86YR6 584 aa24.96■■□□□ 1.59
KNL1-207ENST00000531626 PIAS4Q8N2W9 510 aaPredicted RBP24.83■■□□□ 1.57
KNL1-207ENST00000531626 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
KNL1-207ENST00000531626 ADRA2BP18089 450 aa24.51■■□□□ 1.51
KNL1-207ENST00000531626 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
KNL1-207ENST00000531626 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
KNL1-207ENST00000531626 MAPK8IP2Q13387 824 aaPredicted RBP22.57■■□□□ 1.2
KNL1-207ENST00000531626 PPP4R3CPQ6ZMV5 832 aa21.85■■□□□ 1.09
KNL1-207ENST00000531626 CACNB1Q02641 598 aaPredicted RBP21.68■■□□□ 1.06
KNL1-207ENST00000531626 HOXD11P31277 338 aaPredicted RBP21.67■■□□□ 1.06
KNL1-207ENST00000531626 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
KNL1-207ENST00000531626 CNKSR2Q8WXI2 1034 aa21.55■■□□□ 1.04
KNL1-207ENST00000531626 RNF216Q9NWF9 866 aaPredicted RBP21.44■■□□□ 1.02
KNL1-207ENST00000531626 RNF39Q9H2S5 420 aa21.36■■□□□ 1.01
KNL1-207ENST00000531626 C1QBPQ07021 282 aaKnown RBP21.08■□□□□ 0.97
KNL1-207ENST00000531626 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
KNL1-207ENST00000531626 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
KNL1-207ENST00000531626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.63■□□□□ 0.89
KNL1-207ENST00000531626 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
KNL1-207ENST00000531626 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.81
KNL1-207ENST00000531626 CAPN15O75808 1086 aa19.93■□□□□ 0.78
KNL1-207ENST00000531626 KCNA4P22459 653 aa19.92■□□□□ 0.78
KNL1-207ENST00000531626 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
KNL1-207ENST00000531626 DSG3P32926 999 aa19.88■□□□□ 0.77
KNL1-207ENST00000531626 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
KNL1-207ENST00000531626 APLP2Q06481 763 aa19.7■□□□□ 0.74
KNL1-207ENST00000531626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
KNL1-207ENST00000531626 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
KNL1-207ENST00000531626 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
KNL1-207ENST00000531626 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
KNL1-207ENST00000531626 POTEHQ6S545 545 aa19.51■□□□□ 0.71
KNL1-207ENST00000531626 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
KNL1-207ENST00000531626 ABCB7O75027 752 aa19.4■□□□□ 0.7
KNL1-207ENST00000531626 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
KNL1-207ENST00000531626 RBM42Q9BTD8 480 aaKnown RBP19.07■□□□□ 0.64
KNL1-207ENST00000531626 POLA2Q14181 598 aa18.93■□□□□ 0.62
KNL1-207ENST00000531626 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
KNL1-207ENST00000531626 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
KNL1-207ENST00000531626 CHRDL2Q6WN34 429 aa18.71■□□□□ 0.59
KNL1-207ENST00000531626 ZBTB12Q9Y330 459 aaPredicted RBP18.65■□□□□ 0.58
KNL1-207ENST00000531626 ATF5Q9Y2D1 282 aaPredicted RBP18.59■□□□□ 0.57
KNL1-207ENST00000531626 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
KNL1-207ENST00000531626 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
KNL1-207ENST00000531626 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
KNL1-207ENST00000531626 ZBTB22O15209 634 aa18.28■□□□□ 0.52
KNL1-207ENST00000531626 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
KNL1-207ENST00000531626 PIP4P2Q8N4L2 257 aa18.17■□□□□ 0.5
KNL1-207ENST00000531626 SP7Q8TDD2 431 aaPredicted RBP18.16■□□□□ 0.5
KNL1-207ENST00000531626 PITPNM1O00562 1244 aa18.12■□□□□ 0.49
KNL1-207ENST00000531626 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
KNL1-207ENST00000531626 FBLN2P98095 1184 aa18.02■□□□□ 0.48
KNL1-207ENST00000531626 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
KNL1-207ENST00000531626 SPDYE6P0CI01 402 aa18■□□□□ 0.47
KNL1-207ENST00000531626 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
KNL1-207ENST00000531626 HAX1O00165 279 aa17.92■□□□□ 0.46
KNL1-207ENST00000531626 SPDYE1Q8NFV5 336 aaPredicted RBP17.76■□□□□ 0.43
KNL1-207ENST00000531626 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
KNL1-207ENST00000531626 SSUH2Q9Y2M2 353 aa17.7■□□□□ 0.42
KNL1-207ENST00000531626 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
KNL1-207ENST00000531626 CLEC11AQ9Y240 323 aa17.67■□□□□ 0.42
KNL1-207ENST00000531626 PRKAR2AP13861 404 aaKnown RBP17.65■□□□□ 0.42
KNL1-207ENST00000531626 EVX2Q03828 476 aa17.6■□□□□ 0.41
KNL1-207ENST00000531626 C19orf67A6NJJ6 358 aa17.48■□□□□ 0.39
KNL1-207ENST00000531626 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
KNL1-207ENST00000531626 PRR29P0C7W0 189 aa17.37■□□□□ 0.37
KNL1-207ENST00000531626 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
KNL1-207ENST00000531626 GABBR2O75899 941 aa17.26■□□□□ 0.35
KNL1-207ENST00000531626 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
KNL1-207ENST00000531626 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
KNL1-207ENST00000531626 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
KNL1-207ENST00000531626 CLCN6P51797 869 aa17.03■□□□□ 0.32
KNL1-207ENST00000531626 LHX8Q68G74 356 aa17.01■□□□□ 0.31
KNL1-207ENST00000531626 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
KNL1-207ENST00000531626 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
KNL1-207ENST00000531626 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
KNL1-207ENST00000531626 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
KNL1-207ENST00000531626 SPDYE4A6NLX3 237 aa16.81■□□□□ 0.28
KNL1-207ENST00000531626 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
KNL1-207ENST00000531626 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
KNL1-207ENST00000531626 DCBLD2Q96PD2 775 aa16.77■□□□□ 0.28
KNL1-207ENST00000531626 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
KNL1-207ENST00000531626 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
KNL1-207ENST00000531626 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
KNL1-207ENST00000531626 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
KNL1-207ENST00000531626 PHF12Q96QT6 1004 aa16.5■□□□□ 0.23
KNL1-207ENST00000531626 PROM2Q8N271 834 aa16.38■□□□□ 0.21
KNL1-207ENST00000531626 OTUD5Q96G74 571 aa16.32■□□□□ 0.2
KNL1-207ENST00000531626 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
KNL1-207ENST00000531626 MS4A3Q96HJ5 214 aa16.28■□□□□ 0.2
KNL1-207ENST00000531626 ASTLQ6HA08 431 aaPredicted RBP16.27■□□□□ 0.2
KNL1-207ENST00000531626 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
KNL1-207ENST00000531626 SLC39A7Q92504 469 aa16.22■□□□□ 0.19
KNL1-207ENST00000531626 PLSCR2Q9NRY7 297 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms