RNA–Protein interactions for RNA: ENST00000531242.1

NUCB2-213, Transcript of nucleobindin 2, humanhuman

TSL 2

Gene NUCB2, Length 639 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-213ENST00000531242 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
NUCB2-213ENST00000531242 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
NUCB2-213ENST00000531242 PHF23Q9BUL5 403 aaPredicted RBP26.48■■□□□ 1.83
NUCB2-213ENST00000531242 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
NUCB2-213ENST00000531242 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
NUCB2-213ENST00000531242 FOXD1Q16676 465 aa23.37■■□□□ 1.33
NUCB2-213ENST00000531242 ADRA2BP18089 450 aa23.09■■□□□ 1.29
NUCB2-213ENST00000531242 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
NUCB2-213ENST00000531242 KCNA4P22459 653 aa22.29■■□□□ 1.16
NUCB2-213ENST00000531242 PIAS4Q8N2W9 510 aaPredicted RBP22.28■■□□□ 1.16
NUCB2-213ENST00000531242 PPP4R3CPQ6ZMV5 832 aa21.97■■□□□ 1.11
NUCB2-213ENST00000531242 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
NUCB2-213ENST00000531242 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
NUCB2-213ENST00000531242 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
NUCB2-213ENST00000531242 MSH5O43196 834 aa21.41■■□□□ 1.02
NUCB2-213ENST00000531242 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
NUCB2-213ENST00000531242 NPM3O75607 178 aaKnown RBP21.28■■□□□ 1
NUCB2-213ENST00000531242 CNKSR2Q8WXI2 1034 aa21.25■□□□□ 0.99
NUCB2-213ENST00000531242 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
NUCB2-213ENST00000531242 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
NUCB2-213ENST00000531242 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
NUCB2-213ENST00000531242 RNF216Q9NWF9 866 aaPredicted RBP20.64■□□□□ 0.89
NUCB2-213ENST00000531242 ZBTB22O15209 634 aa20.48■□□□□ 0.87
NUCB2-213ENST00000531242 FOXD4L1Q9NU39 408 aa20.4■□□□□ 0.86
NUCB2-213ENST00000531242 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
NUCB2-213ENST00000531242 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
NUCB2-213ENST00000531242 SLC4A2P04920 1241 aa19.86■□□□□ 0.77
NUCB2-213ENST00000531242 MYCNP04198 464 aaPredicted RBP19.74■□□□□ 0.75
NUCB2-213ENST00000531242 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
NUCB2-213ENST00000531242 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
NUCB2-213ENST00000531242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.681e-6■■■■□ 21.9
NUCB2-213ENST00000531242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
NUCB2-213ENST00000531242 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
NUCB2-213ENST00000531242 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
NUCB2-213ENST00000531242 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
NUCB2-213ENST00000531242 FKBP8Q14318 412 aa19.03■□□□□ 0.64
NUCB2-213ENST00000531242 APLP2Q06481 763 aa18.96■□□□□ 0.63
NUCB2-213ENST00000531242 ATF5Q9Y2D1 282 aaPredicted RBP18.96■□□□□ 0.63
NUCB2-213ENST00000531242 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
NUCB2-213ENST00000531242 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
NUCB2-213ENST00000531242 RTN4Q9NQC3 1192 aaKnown RBP18.68■□□□□ 0.58
NUCB2-213ENST00000531242 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
NUCB2-213ENST00000531242 FBLN2P98095 1184 aa18.33■□□□□ 0.52
NUCB2-213ENST00000531242 FBXO3Q9UK99 471 aa18.33■□□□□ 0.52
NUCB2-213ENST00000531242 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
NUCB2-213ENST00000531242 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
NUCB2-213ENST00000531242 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
NUCB2-213ENST00000531242 C1QBPQ07021 282 aaKnown RBP18.26■□□□□ 0.51
NUCB2-213ENST00000531242 MKRN4PQ13434 485 aaPredicted RBP18.22■□□□□ 0.51
NUCB2-213ENST00000531242 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
NUCB2-213ENST00000531242 CAPN15O75808 1086 aa18.19■□□□□ 0.5
NUCB2-213ENST00000531242 POLA2Q14181 598 aa18.19■□□□□ 0.5
NUCB2-213ENST00000531242 PROM2Q8N271 834 aa18.15■□□□□ 0.5
NUCB2-213ENST00000531242 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
NUCB2-213ENST00000531242 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
NUCB2-213ENST00000531242 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
NUCB2-213ENST00000531242 ABCB7O75027 752 aa17.83■□□□□ 0.44
NUCB2-213ENST00000531242 DSG3P32926 999 aa17.7■□□□□ 0.42
NUCB2-213ENST00000531242 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
NUCB2-213ENST00000531242 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.41
NUCB2-213ENST00000531242 SPDYE6P0CI01 402 aa17.64■□□□□ 0.41
NUCB2-213ENST00000531242 SPDYE2Q495Y8 402 aa17.64■□□□□ 0.41
NUCB2-213ENST00000531242 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
NUCB2-213ENST00000531242 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
NUCB2-213ENST00000531242 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
NUCB2-213ENST00000531242 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
NUCB2-213ENST00000531242 SPOCK2Q92563 424 aa17.43■□□□□ 0.38
NUCB2-213ENST00000531242 KLHL34Q8N239 644 aa17.42■□□□□ 0.38
NUCB2-213ENST00000531242 PKD2Q13563 968 aa17.4■□□□□ 0.38
NUCB2-213ENST00000531242 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
NUCB2-213ENST00000531242 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
NUCB2-213ENST00000531242 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
NUCB2-213ENST00000531242 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
NUCB2-213ENST00000531242 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
NUCB2-213ENST00000531242 MIER1Q8N108 512 aa17.27■□□□□ 0.36
NUCB2-213ENST00000531242 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
NUCB2-213ENST00000531242 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
NUCB2-213ENST00000531242 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
NUCB2-213ENST00000531242 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
NUCB2-213ENST00000531242 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
NUCB2-213ENST00000531242 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
NUCB2-213ENST00000531242 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
NUCB2-213ENST00000531242 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
NUCB2-213ENST00000531242 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
NUCB2-213ENST00000531242 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
NUCB2-213ENST00000531242 RGL2O15211 777 aa16.92■□□□□ 0.3
NUCB2-213ENST00000531242 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
NUCB2-213ENST00000531242 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
NUCB2-213ENST00000531242 GSE1Q14687 1217 aa16.87■□□□□ 0.29
NUCB2-213ENST00000531242 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
NUCB2-213ENST00000531242 PAXIP1Q6ZW49 1069 aaPredicted RBP16.8■□□□□ 0.28
NUCB2-213ENST00000531242 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
NUCB2-213ENST00000531242 BCANQ96GW7 911 aa16.77■□□□□ 0.28
NUCB2-213ENST00000531242 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
NUCB2-213ENST00000531242 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
NUCB2-213ENST00000531242 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
NUCB2-213ENST00000531242 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
NUCB2-213ENST00000531242 NUBP1P53384 320 aa16.72■□□□□ 0.27
NUCB2-213ENST00000531242 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
NUCB2-213ENST00000531242 HS6ST3Q8IZP7 471 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms