RNA–Protein interactions for RNA: ENST00000530709.5

USP33-216, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-216ENST00000530709 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
USP33-216ENST00000530709 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
USP33-216ENST00000530709 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
USP33-216ENST00000530709 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
USP33-216ENST00000530709 FOXD1Q16676 465 aa22.66■■□□□ 1.22
USP33-216ENST00000530709 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
USP33-216ENST00000530709 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
USP33-216ENST00000530709 ADRA2BP18089 450 aa21.44■■□□□ 1.02
USP33-216ENST00000530709 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
USP33-216ENST00000530709 MSH5O43196 834 aa21.03■□□□□ 0.96
USP33-216ENST00000530709 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
USP33-216ENST00000530709 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
USP33-216ENST00000530709 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
USP33-216ENST00000530709 PPP4R3CPQ6ZMV5 832 aa19.43■□□□□ 0.7
USP33-216ENST00000530709 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
USP33-216ENST00000530709 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
USP33-216ENST00000530709 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
USP33-216ENST00000530709 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
USP33-216ENST00000530709 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
USP33-216ENST00000530709 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
USP33-216ENST00000530709 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
USP33-216ENST00000530709 KCNA4P22459 653 aa18.44■□□□□ 0.54
USP33-216ENST00000530709 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
USP33-216ENST00000530709 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
USP33-216ENST00000530709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
USP33-216ENST00000530709 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
USP33-216ENST00000530709 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
USP33-216ENST00000530709 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
USP33-216ENST00000530709 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
USP33-216ENST00000530709 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
USP33-216ENST00000530709 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
USP33-216ENST00000530709 CAPN15O75808 1086 aa17.24■□□□□ 0.35
USP33-216ENST00000530709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
USP33-216ENST00000530709 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
USP33-216ENST00000530709 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
USP33-216ENST00000530709 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
USP33-216ENST00000530709 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
USP33-216ENST00000530709 APLP2Q06481 763 aa17.05■□□□□ 0.32
USP33-216ENST00000530709 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
USP33-216ENST00000530709 DSG3P32926 999 aa16.97■□□□□ 0.31
USP33-216ENST00000530709 ZBTB22O15209 634 aa16.94■□□□□ 0.3
USP33-216ENST00000530709 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
USP33-216ENST00000530709 ABCB7O75027 752 aa16.89■□□□□ 0.29
USP33-216ENST00000530709 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
USP33-216ENST00000530709 POLA2Q14181 598 aa16.63■□□□□ 0.25
USP33-216ENST00000530709 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
USP33-216ENST00000530709 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
USP33-216ENST00000530709 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
USP33-216ENST00000530709 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
USP33-216ENST00000530709 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
USP33-216ENST00000530709 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
USP33-216ENST00000530709 FBLN2P98095 1184 aa16.02■□□□□ 0.16
USP33-216ENST00000530709 MKRN4PQ13434 485 aaPredicted RBP15.92■□□□□ 0.14
USP33-216ENST00000530709 AKT1S1Q96B36 256 aa15.86■□□□□ 0.13
USP33-216ENST00000530709 POTEHQ6S545 545 aa15.79■□□□□ 0.12
USP33-216ENST00000530709 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
USP33-216ENST00000530709 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
USP33-216ENST00000530709 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
USP33-216ENST00000530709 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
USP33-216ENST00000530709 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
USP33-216ENST00000530709 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
USP33-216ENST00000530709 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
USP33-216ENST00000530709 SSUH2Q9Y2M2 353 aa15.55■□□□□ 0.08
USP33-216ENST00000530709 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
USP33-216ENST00000530709 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP33-216ENST00000530709 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
USP33-216ENST00000530709 PIP4P2Q8N4L2 257 aa15.42■□□□□ 0.06
USP33-216ENST00000530709 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
USP33-216ENST00000530709 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
USP33-216ENST00000530709 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
USP33-216ENST00000530709 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
USP33-216ENST00000530709 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
USP33-216ENST00000530709 HAX1O00165 279 aa15.13■□□□□ 0.01
USP33-216ENST00000530709 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
USP33-216ENST00000530709 FKBP8Q14318 412 aa14.96□□□□□ -0.01
USP33-216ENST00000530709 EVX2Q03828 476 aa14.94□□□□□ -0.02
USP33-216ENST00000530709 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
USP33-216ENST00000530709 PROM2Q8N271 834 aa14.89□□□□□ -0.03
USP33-216ENST00000530709 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
USP33-216ENST00000530709 FARP1Q9Y4F1 1045 aaPredicted RBP14.89□□□□□ -0.03
USP33-216ENST00000530709 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
USP33-216ENST00000530709 CD44P16070 742 aaKnown RBP14.74□□□□□ -0.05
USP33-216ENST00000530709 MIER1Q8N108 512 aa14.68□□□□□ -0.06
USP33-216ENST00000530709 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
USP33-216ENST00000530709 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
USP33-216ENST00000530709 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
USP33-216ENST00000530709 GABBR2O75899 941 aa14.6□□□□□ -0.07
USP33-216ENST00000530709 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
USP33-216ENST00000530709 PLCD3Q8N3E9 789 aa14.6□□□□□ -0.07
USP33-216ENST00000530709 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
USP33-216ENST00000530709 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
USP33-216ENST00000530709 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
USP33-216ENST00000530709 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
USP33-216ENST00000530709 PHF12Q96QT6 1004 aa14.43□□□□□ -0.1
USP33-216ENST00000530709 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
USP33-216ENST00000530709 CLCN6P51797 869 aa14.35□□□□□ -0.11
USP33-216ENST00000530709 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
USP33-216ENST00000530709 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
USP33-216ENST00000530709 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
USP33-216ENST00000530709 DCBLD2Q96PD2 775 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms