RNA–Protein interactions for RNA: ENST00000530265.1

SCUBE2-210, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-210ENST00000530265 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
SCUBE2-210ENST00000530265 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
SCUBE2-210ENST00000530265 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
SCUBE2-210ENST00000530265 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
SCUBE2-210ENST00000530265 FOXD1Q16676 465 aa19.57■□□□□ 0.72
SCUBE2-210ENST00000530265 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
SCUBE2-210ENST00000530265 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
SCUBE2-210ENST00000530265 ADRA2BP18089 450 aa18.54■□□□□ 0.56
SCUBE2-210ENST00000530265 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
SCUBE2-210ENST00000530265 MSH5O43196 834 aa18.06■□□□□ 0.48
SCUBE2-210ENST00000530265 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
SCUBE2-210ENST00000530265 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
SCUBE2-210ENST00000530265 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
SCUBE2-210ENST00000530265 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
SCUBE2-210ENST00000530265 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
SCUBE2-210ENST00000530265 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
SCUBE2-210ENST00000530265 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
SCUBE2-210ENST00000530265 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
SCUBE2-210ENST00000530265 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
SCUBE2-210ENST00000530265 KCNA4P22459 653 aa16.12■□□□□ 0.17
SCUBE2-210ENST00000530265 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
SCUBE2-210ENST00000530265 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
SCUBE2-210ENST00000530265 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
SCUBE2-210ENST00000530265 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
SCUBE2-210ENST00000530265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCUBE2-210ENST00000530265 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
SCUBE2-210ENST00000530265 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
SCUBE2-210ENST00000530265 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
SCUBE2-210ENST00000530265 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
SCUBE2-210ENST00000530265 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
SCUBE2-210ENST00000530265 ZBTB22O15209 634 aa14.9□□□□□ -0.02
SCUBE2-210ENST00000530265 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
SCUBE2-210ENST00000530265 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
SCUBE2-210ENST00000530265 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
SCUBE2-210ENST00000530265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
SCUBE2-210ENST00000530265 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
SCUBE2-210ENST00000530265 CAPN15O75808 1086 aa14.73□□□□□ -0.05
SCUBE2-210ENST00000530265 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
SCUBE2-210ENST00000530265 DSG3P32926 999 aa14.67□□□□□ -0.06
SCUBE2-210ENST00000530265 APLP2Q06481 763 aa14.63□□□□□ -0.07
SCUBE2-210ENST00000530265 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
SCUBE2-210ENST00000530265 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
SCUBE2-210ENST00000530265 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
SCUBE2-210ENST00000530265 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
SCUBE2-210ENST00000530265 ABCB7O75027 752 aa14.47□□□□□ -0.09
SCUBE2-210ENST00000530265 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
SCUBE2-210ENST00000530265 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
SCUBE2-210ENST00000530265 POLA2Q14181 598 aa14.33□□□□□ -0.12
SCUBE2-210ENST00000530265 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
SCUBE2-210ENST00000530265 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
SCUBE2-210ENST00000530265 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
SCUBE2-210ENST00000530265 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
SCUBE2-210ENST00000530265 FBLN2P98095 1184 aa13.78□□□□□ -0.2
SCUBE2-210ENST00000530265 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
SCUBE2-210ENST00000530265 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
SCUBE2-210ENST00000530265 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
SCUBE2-210ENST00000530265 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
SCUBE2-210ENST00000530265 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
SCUBE2-210ENST00000530265 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
SCUBE2-210ENST00000530265 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
SCUBE2-210ENST00000530265 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
SCUBE2-210ENST00000530265 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
SCUBE2-210ENST00000530265 POTEHQ6S545 545 aa13.44□□□□□ -0.26
SCUBE2-210ENST00000530265 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCUBE2-210ENST00000530265 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
SCUBE2-210ENST00000530265 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
SCUBE2-210ENST00000530265 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
SCUBE2-210ENST00000530265 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
SCUBE2-210ENST00000530265 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
SCUBE2-210ENST00000530265 PROM2Q8N271 834 aa13.18□□□□□ -0.3
SCUBE2-210ENST00000530265 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
SCUBE2-210ENST00000530265 PRKAR2AP13861 404 aaKnown RBP13.06□□□□□ -0.32
SCUBE2-210ENST00000530265 FKBP8Q14318 412 aa13.03□□□□□ -0.32
SCUBE2-210ENST00000530265 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
SCUBE2-210ENST00000530265 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
SCUBE2-210ENST00000530265 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
SCUBE2-210ENST00000530265 EVX2Q03828 476 aa12.89□□□□□ -0.35
SCUBE2-210ENST00000530265 HAX1O00165 279 aa12.85□□□□□ -0.35
SCUBE2-210ENST00000530265 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
SCUBE2-210ENST00000530265 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
SCUBE2-210ENST00000530265 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
SCUBE2-210ENST00000530265 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
SCUBE2-210ENST00000530265 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
SCUBE2-210ENST00000530265 MIER1Q8N108 512 aa12.64□□□□□ -0.39
SCUBE2-210ENST00000530265 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
SCUBE2-210ENST00000530265 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCUBE2-210ENST00000530265 GABBR2O75899 941 aa12.54□□□□□ -0.4
SCUBE2-210ENST00000530265 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
SCUBE2-210ENST00000530265 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
SCUBE2-210ENST00000530265 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
SCUBE2-210ENST00000530265 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
SCUBE2-210ENST00000530265 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
SCUBE2-210ENST00000530265 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
SCUBE2-210ENST00000530265 NUBP1P53384 320 aa12.46□□□□□ -0.41
SCUBE2-210ENST00000530265 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
SCUBE2-210ENST00000530265 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
SCUBE2-210ENST00000530265 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
SCUBE2-210ENST00000530265 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
SCUBE2-210ENST00000530265 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
SCUBE2-210ENST00000530265 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms