RNA–Protein interactions for RNA: ENST00000529843.1

BEST3-206, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-206ENST00000529843 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
BEST3-206ENST00000529843 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
BEST3-206ENST00000529843 PHF23Q9BUL5 403 aaPredicted RBP13.54□□□□□ -0.24
BEST3-206ENST00000529843 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.33
BEST3-206ENST00000529843 PLPPR3Q6T4P5 718 aa12.53□□□□□ -0.4
BEST3-206ENST00000529843 FOXD1Q16676 465 aa12.09□□□□□ -0.47
BEST3-206ENST00000529843 PPP6R1Q9UPN7 881 aa11.86□□□□□ -0.51
BEST3-206ENST00000529843 ADRA2BP18089 450 aa11.84□□□□□ -0.51
BEST3-206ENST00000529843 PIAS4Q8N2W9 510 aaPredicted RBP11.43□□□□□ -0.58
BEST3-206ENST00000529843 KCNA4P22459 653 aa11.15□□□□□ -0.62
BEST3-206ENST00000529843 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
BEST3-206ENST00000529843 MSH5O43196 834 aa11□□□□□ -0.65
BEST3-206ENST00000529843 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
BEST3-206ENST00000529843 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
BEST3-206ENST00000529843 NPM3O75607 178 aaKnown RBP10.73□□□□□ -0.69
BEST3-206ENST00000529843 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
BEST3-206ENST00000529843 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
BEST3-206ENST00000529843 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
BEST3-206ENST00000529843 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
BEST3-206ENST00000529843 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.73
BEST3-206ENST00000529843 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
BEST3-206ENST00000529843 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
BEST3-206ENST00000529843 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
BEST3-206ENST00000529843 HOXD11P31277 338 aaPredicted RBP10.35□□□□□ -0.75
BEST3-206ENST00000529843 ZBTB22O15209 634 aa10.3□□□□□ -0.76
BEST3-206ENST00000529843 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
BEST3-206ENST00000529843 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
BEST3-206ENST00000529843 DCAF8L1A6NGE4 600 aa9.94□□□□□ -0.82
BEST3-206ENST00000529843 MYCNP04198 464 aaPredicted RBP9.88□□□□□ -0.83
BEST3-206ENST00000529843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.82□□□□□ -0.84
BEST3-206ENST00000529843 ATXN8OSP0DMR3 200 aa9.77□□□□□ -0.85
BEST3-206ENST00000529843 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
BEST3-206ENST00000529843 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.86
BEST3-206ENST00000529843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.64□□□□□ -0.87
BEST3-206ENST00000529843 HNRNPUL2Q1KMD3 747 aaKnown RBP9.64□□□□□ -0.87
BEST3-206ENST00000529843 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
BEST3-206ENST00000529843 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
BEST3-206ENST00000529843 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
BEST3-206ENST00000529843 APLP2Q06481 763 aa9.45□□□□□ -0.9
BEST3-206ENST00000529843 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
BEST3-206ENST00000529843 SPINK5Q9NQ38 1064 aaPredicted RBP9.39□□□□□ -0.91
BEST3-206ENST00000529843 FKBP8Q14318 412 aa9.38□□□□□ -0.91
BEST3-206ENST00000529843 C1QBPQ07021 282 aaKnown RBP9.36□□□□□ -0.91
BEST3-206ENST00000529843 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
BEST3-206ENST00000529843 CAPN15O75808 1086 aa9.29□□□□□ -0.92
BEST3-206ENST00000529843 MKRN4PQ13434 485 aaPredicted RBP9.24□□□□□ -0.93
BEST3-206ENST00000529843 POLA2Q14181 598 aa9.24□□□□□ -0.93
BEST3-206ENST00000529843 ABCB7O75027 752 aa9.16□□□□□ -0.94
BEST3-206ENST00000529843 FBLN2P98095 1184 aa9.14□□□□□ -0.95
BEST3-206ENST00000529843 DSG3P32926 999 aa9.12□□□□□ -0.95
BEST3-206ENST00000529843 SPDYE4A6NLX3 237 aa9.11□□□□□ -0.95
BEST3-206ENST00000529843 ZBTB12Q9Y330 459 aaPredicted RBP9.07□□□□□ -0.96
BEST3-206ENST00000529843 PROM2Q8N271 834 aa9.05□□□□□ -0.96
BEST3-206ENST00000529843 RTN4Q9NQC3 1192 aaKnown RBP9.02□□□□□ -0.97
BEST3-206ENST00000529843 CACNB1Q02641 598 aaPredicted RBP9□□□□□ -0.97
BEST3-206ENST00000529843 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
BEST3-206ENST00000529843 OSCARQ8IYS5 282 aa8.94□□□□□ -0.98
BEST3-206ENST00000529843 FBXO3Q9UK99 471 aa8.94□□□□□ -0.98
BEST3-206ENST00000529843 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
BEST3-206ENST00000529843 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
BEST3-206ENST00000529843 SPDYE2Q495Y8 402 aa8.87□□□□□ -0.99
BEST3-206ENST00000529843 ZNF692Q9BU19 519 aaPredicted RBP8.87□□□□□ -0.99
BEST3-206ENST00000529843 SSUH2Q9Y2M2 353 aa8.86□□□□□ -0.99
BEST3-206ENST00000529843 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
BEST3-206ENST00000529843 PABPN1Q86U42 306 aaKnown RBP eCLIP8.78□□□□□ -1
BEST3-206ENST00000529843 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
BEST3-206ENST00000529843 STAG3Q9UJ98 1225 aa8.7□□□□□ -1.02
BEST3-206ENST00000529843 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
BEST3-206ENST00000529843 PLCD3Q8N3E9 789 aa8.6□□□□□ -1.03
BEST3-206ENST00000529843 AKT1S1Q96B36 256 aa8.6□□□□□ -1.03
BEST3-206ENST00000529843 PKD2Q13563 968 aa8.59□□□□□ -1.03
BEST3-206ENST00000529843 MIER1Q8N108 512 aa8.59□□□□□ -1.03
BEST3-206ENST00000529843 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
BEST3-206ENST00000529843 SPOCK2Q92563 424 aa8.58□□□□□ -1.04
BEST3-206ENST00000529843 SLC24A1O60721 1099 aa8.55□□□□□ -1.04
BEST3-206ENST00000529843 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
BEST3-206ENST00000529843 REM2Q8IYK8 340 aaPredicted RBP8.53□□□□□ -1.04
BEST3-206ENST00000529843 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
BEST3-206ENST00000529843 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
BEST3-206ENST00000529843 CLEC11AQ9Y240 323 aa8.48□□□□□ -1.05
BEST3-206ENST00000529843 PITPNM1O00562 1244 aa8.44□□□□□ -1.06
BEST3-206ENST00000529843 PRR29P0C7W0 189 aa8.44□□□□□ -1.06
BEST3-206ENST00000529843 CREBZFQ9NS37 354 aa8.44□□□□□ -1.06
BEST3-206ENST00000529843 ECM2O94769 699 aaPredicted RBP8.43□□□□□ -1.06
BEST3-206ENST00000529843 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
BEST3-206ENST00000529843 DCAF8L2P0C7V8 631 aa8.4□□□□□ -1.06
BEST3-206ENST00000529843 NUBP1P53384 320 aa8.4□□□□□ -1.06
BEST3-206ENST00000529843 CIZ1Q9ULV3 898 aaPredicted RBP8.39□□□□□ -1.07
BEST3-206ENST00000529843 RGL2O15211 777 aa8.38□□□□□ -1.07
BEST3-206ENST00000529843 PLCB2Q00722 1185 aa8.34□□□□□ -1.07
BEST3-206ENST00000529843 NPM1P06748 294 aaKnown RBP eCLIP8.32□□□□□ -1.08
BEST3-206ENST00000529843 GSE1Q14687 1217 aa8.32□□□□□ -1.08
BEST3-206ENST00000529843 TRIM41Q8WV44 630 aa8.31□□□□□ -1.08
BEST3-206ENST00000529843 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
BEST3-206ENST00000529843 RNF25Q96BH1 459 aaPredicted RBP8.29□□□□□ -1.08
BEST3-206ENST00000529843 DCAF8Q5TAQ9 597 aa8.28□□□□□ -1.08
BEST3-206ENST00000529843 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
BEST3-206ENST00000529843 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
BEST3-206ENST00000529843 BBXQ8WY36 941 aaPredicted RBP8.26□□□□□ -1.09
BEST3-206ENST00000529843 FXR2P51116 673 aaKnown RBP eCLIP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms