RNA–Protein interactions for RNA: ENST00000529809.5

VAV3-213, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-213ENST00000529809 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
VAV3-213ENST00000529809 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
VAV3-213ENST00000529809 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
VAV3-213ENST00000529809 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
VAV3-213ENST00000529809 FOXD1Q16676 465 aa21.37■■□□□ 1.01
VAV3-213ENST00000529809 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
VAV3-213ENST00000529809 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
VAV3-213ENST00000529809 MSH5O43196 834 aa20.01■□□□□ 0.79
VAV3-213ENST00000529809 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
VAV3-213ENST00000529809 ADRA2BP18089 450 aa19.97■□□□□ 0.79
VAV3-213ENST00000529809 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
VAV3-213ENST00000529809 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
VAV3-213ENST00000529809 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
VAV3-213ENST00000529809 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
VAV3-213ENST00000529809 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
VAV3-213ENST00000529809 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
VAV3-213ENST00000529809 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
VAV3-213ENST00000529809 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
VAV3-213ENST00000529809 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
VAV3-213ENST00000529809 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
VAV3-213ENST00000529809 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
VAV3-213ENST00000529809 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
VAV3-213ENST00000529809 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
VAV3-213ENST00000529809 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
VAV3-213ENST00000529809 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
VAV3-213ENST00000529809 KCNA4P22459 653 aa16.78■□□□□ 0.28
VAV3-213ENST00000529809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
VAV3-213ENST00000529809 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
VAV3-213ENST00000529809 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
VAV3-213ENST00000529809 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
VAV3-213ENST00000529809 CAPN15O75808 1086 aa16.1■□□□□ 0.17
VAV3-213ENST00000529809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
VAV3-213ENST00000529809 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
VAV3-213ENST00000529809 DSG3P32926 999 aa16■□□□□ 0.15
VAV3-213ENST00000529809 APLP2Q06481 763 aa16■□□□□ 0.15
VAV3-213ENST00000529809 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
VAV3-213ENST00000529809 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
VAV3-213ENST00000529809 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
VAV3-213ENST00000529809 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
VAV3-213ENST00000529809 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
VAV3-213ENST00000529809 ABCB7O75027 752 aa15.69■□□□□ 0.1
VAV3-213ENST00000529809 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
VAV3-213ENST00000529809 POLA2Q14181 598 aa15.47■□□□□ 0.07
VAV3-213ENST00000529809 ZBTB22O15209 634 aa15.4■□□□□ 0.06
VAV3-213ENST00000529809 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
VAV3-213ENST00000529809 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
VAV3-213ENST00000529809 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
VAV3-213ENST00000529809 POTEHQ6S545 545 aa15.2■□□□□ 0.02
VAV3-213ENST00000529809 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
VAV3-213ENST00000529809 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
VAV3-213ENST00000529809 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
VAV3-213ENST00000529809 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
VAV3-213ENST00000529809 FBLN2P98095 1184 aa14.83□□□□□ -0.04
VAV3-213ENST00000529809 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
VAV3-213ENST00000529809 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
VAV3-213ENST00000529809 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
VAV3-213ENST00000529809 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
VAV3-213ENST00000529809 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
VAV3-213ENST00000529809 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
VAV3-213ENST00000529809 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
VAV3-213ENST00000529809 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
VAV3-213ENST00000529809 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
VAV3-213ENST00000529809 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
VAV3-213ENST00000529809 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
VAV3-213ENST00000529809 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
VAV3-213ENST00000529809 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
VAV3-213ENST00000529809 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
VAV3-213ENST00000529809 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
VAV3-213ENST00000529809 HAX1O00165 279 aa14.29□□□□□ -0.12
VAV3-213ENST00000529809 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
VAV3-213ENST00000529809 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
VAV3-213ENST00000529809 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
VAV3-213ENST00000529809 EVX2Q03828 476 aa14.08□□□□□ -0.16
VAV3-213ENST00000529809 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
VAV3-213ENST00000529809 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
VAV3-213ENST00000529809 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
VAV3-213ENST00000529809 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
VAV3-213ENST00000529809 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
VAV3-213ENST00000529809 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
VAV3-213ENST00000529809 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
VAV3-213ENST00000529809 GABBR2O75899 941 aa13.79□□□□□ -0.2
VAV3-213ENST00000529809 PROM2Q8N271 834 aa13.74□□□□□ -0.21
VAV3-213ENST00000529809 CLCN6P51797 869 aa13.7□□□□□ -0.22
VAV3-213ENST00000529809 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
VAV3-213ENST00000529809 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
VAV3-213ENST00000529809 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
VAV3-213ENST00000529809 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
VAV3-213ENST00000529809 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
VAV3-213ENST00000529809 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
VAV3-213ENST00000529809 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
VAV3-213ENST00000529809 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
VAV3-213ENST00000529809 MIER1Q8N108 512 aa13.42□□□□□ -0.26
VAV3-213ENST00000529809 LHX8Q68G74 356 aa13.41□□□□□ -0.26
VAV3-213ENST00000529809 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
VAV3-213ENST00000529809 FKBP8Q14318 412 aa13.4□□□□□ -0.26
VAV3-213ENST00000529809 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
VAV3-213ENST00000529809 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
VAV3-213ENST00000529809 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
VAV3-213ENST00000529809 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
VAV3-213ENST00000529809 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms