RNA–Protein interactions for RNA: ENST00000529774.1

RDX-207, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-207ENST00000529774 AEBP2Q6ZN18 517 aaPredicted RBP30.51■■■□□ 2.47
RDX-207ENST00000529774 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
RDX-207ENST00000529774 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
RDX-207ENST00000529774 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
RDX-207ENST00000529774 FOXD1Q16676 465 aa24.37■■□□□ 1.49
RDX-207ENST00000529774 MSH5O43196 834 aa23.05■■□□□ 1.28
RDX-207ENST00000529774 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
RDX-207ENST00000529774 POTEDQ86YR6 584 aa22.87■■□□□ 1.25
RDX-207ENST00000529774 PIAS4Q8N2W9 510 aaPredicted RBP22.8■■□□□ 1.24
RDX-207ENST00000529774 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
RDX-207ENST00000529774 ADRA2BP18089 450 aa22.47■■□□□ 1.19
RDX-207ENST00000529774 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
RDX-207ENST00000529774 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
RDX-207ENST00000529774 MAPK8IP2Q13387 824 aaPredicted RBP20.69■□□□□ 0.9
RDX-207ENST00000529774 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
RDX-207ENST00000529774 DCAF8L1A6NGE4 600 aa19.95■□□□□ 0.78
RDX-207ENST00000529774 CACNB1Q02641 598 aaPredicted RBP19.94■□□□□ 0.78
RDX-207ENST00000529774 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
RDX-207ENST00000529774 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
RDX-207ENST00000529774 RNF216Q9NWF9 866 aaPredicted RBP19.64■□□□□ 0.73
RDX-207ENST00000529774 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
RDX-207ENST00000529774 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
RDX-207ENST00000529774 NCBP3Q53F19 620 aaKnown RBP19.27■□□□□ 0.68
RDX-207ENST00000529774 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
RDX-207ENST00000529774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.634e-8■■■■□ 26.2
RDX-207ENST00000529774 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
RDX-207ENST00000529774 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
RDX-207ENST00000529774 CAPN15O75808 1086 aa18.33■□□□□ 0.52
RDX-207ENST00000529774 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
RDX-207ENST00000529774 KCNA4P22459 653 aa18.24■□□□□ 0.51
RDX-207ENST00000529774 DSG3P32926 999 aa18.21■□□□□ 0.51
RDX-207ENST00000529774 APLP2Q06481 763 aa18.11■□□□□ 0.49
RDX-207ENST00000529774 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
RDX-207ENST00000529774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
RDX-207ENST00000529774 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
RDX-207ENST00000529774 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
RDX-207ENST00000529774 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
RDX-207ENST00000529774 POTEHQ6S545 545 aa17.91■□□□□ 0.46
RDX-207ENST00000529774 ABCB7O75027 752 aa17.83■□□□□ 0.44
RDX-207ENST00000529774 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
RDX-207ENST00000529774 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
RDX-207ENST00000529774 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
RDX-207ENST00000529774 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
RDX-207ENST00000529774 POLA2Q14181 598 aa17.38■□□□□ 0.37
RDX-207ENST00000529774 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
RDX-207ENST00000529774 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
RDX-207ENST00000529774 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
RDX-207ENST00000529774 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
RDX-207ENST00000529774 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
RDX-207ENST00000529774 AKT1S1Q96B36 256 aa17■□□□□ 0.31
RDX-207ENST00000529774 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
RDX-207ENST00000529774 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
RDX-207ENST00000529774 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
RDX-207ENST00000529774 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
RDX-207ENST00000529774 ZBTB22O15209 634 aa16.7■□□□□ 0.26
RDX-207ENST00000529774 PIP4P2Q8N4L2 257 aa16.66■□□□□ 0.26
RDX-207ENST00000529774 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
RDX-207ENST00000529774 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
RDX-207ENST00000529774 FBLN2P98095 1184 aa16.56■□□□□ 0.24
RDX-207ENST00000529774 FXR2P51116 673 aaKnown RBP eCLIP16.51■□□□□ 0.23
RDX-207ENST00000529774 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
RDX-207ENST00000529774 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
RDX-207ENST00000529774 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
RDX-207ENST00000529774 HAX1O00165 279 aa16.49■□□□□ 0.23
RDX-207ENST00000529774 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
RDX-207ENST00000529774 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
RDX-207ENST00000529774 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
RDX-207ENST00000529774 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
RDX-207ENST00000529774 PRKAR2AP13861 404 aaKnown RBP16.21■□□□□ 0.19
RDX-207ENST00000529774 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
RDX-207ENST00000529774 EVX2Q03828 476 aa16.12■□□□□ 0.17
RDX-207ENST00000529774 C19orf67A6NJJ6 358 aa16■□□□□ 0.15
RDX-207ENST00000529774 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
RDX-207ENST00000529774 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
RDX-207ENST00000529774 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
RDX-207ENST00000529774 GABBR2O75899 941 aa15.83■□□□□ 0.12
RDX-207ENST00000529774 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
RDX-207ENST00000529774 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
RDX-207ENST00000529774 SLC24A1O60721 1099 aa15.65■□□□□ 0.1
RDX-207ENST00000529774 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
RDX-207ENST00000529774 LHX8Q68G74 356 aa15.63■□□□□ 0.09
RDX-207ENST00000529774 CLCN6P51797 869 aa15.61■□□□□ 0.09
RDX-207ENST00000529774 RTN4Q9NQC3 1192 aaKnown RBP15.58■□□□□ 0.08
RDX-207ENST00000529774 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
RDX-207ENST00000529774 DCBLD2Q96PD2 775 aa15.44■□□□□ 0.06
RDX-207ENST00000529774 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
RDX-207ENST00000529774 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
RDX-207ENST00000529774 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
RDX-207ENST00000529774 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
RDX-207ENST00000529774 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
RDX-207ENST00000529774 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
RDX-207ENST00000529774 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
RDX-207ENST00000529774 FKBP8Q14318 412 aa15.27■□□□□ 0.04
RDX-207ENST00000529774 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
RDX-207ENST00000529774 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
RDX-207ENST00000529774 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
RDX-207ENST00000529774 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
RDX-207ENST00000529774 MS4A3Q96HJ5 214 aa14.94□□□□□ -0.02
RDX-207ENST00000529774 PROM2Q8N271 834 aa14.93□□□□□ -0.02
RDX-207ENST00000529774 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms