RNA–Protein interactions for RNA: ENST00000529676.2

CCDC83-204, Transcript of coiled-coil domain containing 83, humanhuman

TSL 5

Gene CCDC83, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-204ENST00000529676 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
CCDC83-204ENST00000529676 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
CCDC83-204ENST00000529676 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
CCDC83-204ENST00000529676 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
CCDC83-204ENST00000529676 FOXD1Q16676 465 aa19.09■□□□□ 0.65
CCDC83-204ENST00000529676 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
CCDC83-204ENST00000529676 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
CCDC83-204ENST00000529676 ADRA2BP18089 450 aa18.01■□□□□ 0.47
CCDC83-204ENST00000529676 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
CCDC83-204ENST00000529676 MSH5O43196 834 aa17.75■□□□□ 0.43
CCDC83-204ENST00000529676 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
CCDC83-204ENST00000529676 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
CCDC83-204ENST00000529676 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
CCDC83-204ENST00000529676 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
CCDC83-204ENST00000529676 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
CCDC83-204ENST00000529676 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
CCDC83-204ENST00000529676 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
CCDC83-204ENST00000529676 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
CCDC83-204ENST00000529676 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
CCDC83-204ENST00000529676 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
CCDC83-204ENST00000529676 KCNA4P22459 653 aa15.59■□□□□ 0.09
CCDC83-204ENST00000529676 DCAF8L1A6NGE4 600 aa15.56■□□□□ 0.08
CCDC83-204ENST00000529676 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
CCDC83-204ENST00000529676 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
CCDC83-204ENST00000529676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC83-204ENST00000529676 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
CCDC83-204ENST00000529676 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
CCDC83-204ENST00000529676 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
CCDC83-204ENST00000529676 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
CCDC83-204ENST00000529676 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
CCDC83-204ENST00000529676 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
CCDC83-204ENST00000529676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
CCDC83-204ENST00000529676 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
CCDC83-204ENST00000529676 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
CCDC83-204ENST00000529676 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
CCDC83-204ENST00000529676 CAPN15O75808 1086 aa14.41□□□□□ -0.1
CCDC83-204ENST00000529676 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
CCDC83-204ENST00000529676 APLP2Q06481 763 aa14.39□□□□□ -0.11
CCDC83-204ENST00000529676 ZBTB22O15209 634 aa14.38□□□□□ -0.11
CCDC83-204ENST00000529676 DSG3P32926 999 aa14.32□□□□□ -0.12
CCDC83-204ENST00000529676 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
CCDC83-204ENST00000529676 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
CCDC83-204ENST00000529676 ABCB7O75027 752 aa14.12□□□□□ -0.15
CCDC83-204ENST00000529676 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
CCDC83-204ENST00000529676 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
CCDC83-204ENST00000529676 POLA2Q14181 598 aa13.94□□□□□ -0.18
CCDC83-204ENST00000529676 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
CCDC83-204ENST00000529676 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
CCDC83-204ENST00000529676 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
CCDC83-204ENST00000529676 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
CCDC83-204ENST00000529676 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
CCDC83-204ENST00000529676 FBLN2P98095 1184 aa13.48□□□□□ -0.25
CCDC83-204ENST00000529676 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
CCDC83-204ENST00000529676 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
CCDC83-204ENST00000529676 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
CCDC83-204ENST00000529676 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
CCDC83-204ENST00000529676 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
CCDC83-204ENST00000529676 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
CCDC83-204ENST00000529676 POTEHQ6S545 545 aa13.24□□□□□ -0.29
CCDC83-204ENST00000529676 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
CCDC83-204ENST00000529676 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
CCDC83-204ENST00000529676 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CCDC83-204ENST00000529676 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
CCDC83-204ENST00000529676 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC83-204ENST00000529676 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
CCDC83-204ENST00000529676 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
CCDC83-204ENST00000529676 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC83-204ENST00000529676 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
CCDC83-204ENST00000529676 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
CCDC83-204ENST00000529676 PROM2Q8N271 834 aa12.77□□□□□ -0.37
CCDC83-204ENST00000529676 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
CCDC83-204ENST00000529676 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
CCDC83-204ENST00000529676 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
CCDC83-204ENST00000529676 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
CCDC83-204ENST00000529676 HAX1O00165 279 aa12.6□□□□□ -0.39
CCDC83-204ENST00000529676 FKBP8Q14318 412 aa12.6□□□□□ -0.39
CCDC83-204ENST00000529676 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
CCDC83-204ENST00000529676 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
CCDC83-204ENST00000529676 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
CCDC83-204ENST00000529676 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
CCDC83-204ENST00000529676 EVX2Q03828 476 aa12.52□□□□□ -0.41
CCDC83-204ENST00000529676 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
CCDC83-204ENST00000529676 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
CCDC83-204ENST00000529676 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC83-204ENST00000529676 MIER1Q8N108 512 aa12.26□□□□□ -0.45
CCDC83-204ENST00000529676 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
CCDC83-204ENST00000529676 GABBR2O75899 941 aa12.24□□□□□ -0.45
CCDC83-204ENST00000529676 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
CCDC83-204ENST00000529676 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
CCDC83-204ENST00000529676 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
CCDC83-204ENST00000529676 PLCD3Q8N3E9 789 aa12.22□□□□□ -0.45
CCDC83-204ENST00000529676 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
CCDC83-204ENST00000529676 CLCN6P51797 869 aa12.16□□□□□ -0.46
CCDC83-204ENST00000529676 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
CCDC83-204ENST00000529676 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
CCDC83-204ENST00000529676 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
CCDC83-204ENST00000529676 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
CCDC83-204ENST00000529676 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
CCDC83-204ENST00000529676 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
CCDC83-204ENST00000529676 NUBP1P53384 320 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms