RNA–Protein interactions for RNA: ENST00000529588.5

ATM-214, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 502 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-214ENST00000529588 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
ATM-214ENST00000529588 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
ATM-214ENST00000529588 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
ATM-214ENST00000529588 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
ATM-214ENST00000529588 FOXD1Q16676 465 aa22.52■■□□□ 1.2
ATM-214ENST00000529588 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
ATM-214ENST00000529588 MSH5O43196 834 aa21.34■■□□□ 1.01
ATM-214ENST00000529588 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
ATM-214ENST00000529588 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
ATM-214ENST00000529588 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
ATM-214ENST00000529588 ADRA2BP18089 450 aa20.57■□□□□ 0.88
ATM-214ENST00000529588 DMRT2Q9Y5R5 561 aa19.06■□□□□ 0.64
ATM-214ENST00000529588 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
ATM-214ENST00000529588 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
ATM-214ENST00000529588 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
ATM-214ENST00000529588 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
ATM-214ENST00000529588 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
ATM-214ENST00000529588 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
ATM-214ENST00000529588 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
ATM-214ENST00000529588 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
ATM-214ENST00000529588 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
ATM-214ENST00000529588 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
ATM-214ENST00000529588 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
ATM-214ENST00000529588 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
ATM-214ENST00000529588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.362e-7■■□□□ 12.9
ATM-214ENST00000529588 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
ATM-214ENST00000529588 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
ATM-214ENST00000529588 POTEHQ6S545 545 aa16.85■□□□□ 0.29
ATM-214ENST00000529588 DSG3P32926 999 aa16.8■□□□□ 0.28
ATM-214ENST00000529588 CAPN15O75808 1086 aa16.79■□□□□ 0.28
ATM-214ENST00000529588 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
ATM-214ENST00000529588 APLP2Q06481 763 aa16.45■□□□□ 0.22
ATM-214ENST00000529588 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
ATM-214ENST00000529588 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
ATM-214ENST00000529588 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
ATM-214ENST00000529588 ABCB7O75027 752 aa16.33■□□□□ 0.2
ATM-214ENST00000529588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
ATM-214ENST00000529588 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
ATM-214ENST00000529588 KCNA4P22459 653 aa16.27■□□□□ 0.2
ATM-214ENST00000529588 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
ATM-214ENST00000529588 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
ATM-214ENST00000529588 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
ATM-214ENST00000529588 POLA2Q14181 598 aa15.84■□□□□ 0.13
ATM-214ENST00000529588 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
ATM-214ENST00000529588 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
ATM-214ENST00000529588 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
ATM-214ENST00000529588 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
ATM-214ENST00000529588 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
ATM-214ENST00000529588 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
ATM-214ENST00000529588 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
ATM-214ENST00000529588 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
ATM-214ENST00000529588 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
ATM-214ENST00000529588 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
ATM-214ENST00000529588 HAX1O00165 279 aa15.27■□□□□ 0.04
ATM-214ENST00000529588 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
ATM-214ENST00000529588 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.031e-7■■□□□ 12.6
ATM-214ENST00000529588 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
ATM-214ENST00000529588 SPDYE6P0CI01 402 aa15□□□□□ -0.01
ATM-214ENST00000529588 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
ATM-214ENST00000529588 ATXN8OSP0DMR3 200 aa14.99□□□□□ -0.01
ATM-214ENST00000529588 EVX2Q03828 476 aa14.99□□□□□ -0.01
ATM-214ENST00000529588 FBLN2P98095 1184 aa14.94□□□□□ -0.02
ATM-214ENST00000529588 ZBTB22O15209 634 aa14.93□□□□□ -0.02
ATM-214ENST00000529588 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
ATM-214ENST00000529588 SPDYE1Q8NFV5 336 aaPredicted RBP14.86□□□□□ -0.03
ATM-214ENST00000529588 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
ATM-214ENST00000529588 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
ATM-214ENST00000529588 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
ATM-214ENST00000529588 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
ATM-214ENST00000529588 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
ATM-214ENST00000529588 GABBR2O75899 941 aa14.68□□□□□ -0.06
ATM-214ENST00000529588 LHX8Q68G74 356 aa14.6□□□□□ -0.07
ATM-214ENST00000529588 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
ATM-214ENST00000529588 PRR29P0C7W0 189 aa14.54□□□□□ -0.08
ATM-214ENST00000529588 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
ATM-214ENST00000529588 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
ATM-214ENST00000529588 CLCN6P51797 869 aa14.35□□□□□ -0.11
ATM-214ENST00000529588 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
ATM-214ENST00000529588 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
ATM-214ENST00000529588 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
ATM-214ENST00000529588 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
ATM-214ENST00000529588 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
ATM-214ENST00000529588 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
ATM-214ENST00000529588 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
ATM-214ENST00000529588 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
ATM-214ENST00000529588 GALR2O43603 387 aaPredicted RBP13.98□□□□□ -0.17
ATM-214ENST00000529588 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
ATM-214ENST00000529588 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
ATM-214ENST00000529588 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
ATM-214ENST00000529588 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
ATM-214ENST00000529588 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
ATM-214ENST00000529588 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
ATM-214ENST00000529588 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
ATM-214ENST00000529588 POTEMA6NI47 508 aa13.77□□□□□ -0.21
ATM-214ENST00000529588 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
ATM-214ENST00000529588 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
ATM-214ENST00000529588 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
ATM-214ENST00000529588 ASTLQ6HA08 431 aaPredicted RBP13.68□□□□□ -0.22
ATM-214ENST00000529588 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
ATM-214ENST00000529588 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 311.8 ms