RNA–Protein interactions for RNA: ENST00000529172.1

PPP6R3-216, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 2

Gene PPP6R3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-216ENST00000529172 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
PPP6R3-216ENST00000529172 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
PPP6R3-216ENST00000529172 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
PPP6R3-216ENST00000529172 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
PPP6R3-216ENST00000529172 FOXD1Q16676 465 aa17.88■□□□□ 0.45
PPP6R3-216ENST00000529172 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
PPP6R3-216ENST00000529172 MSH5O43196 834 aa16.89■□□□□ 0.29
PPP6R3-216ENST00000529172 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
PPP6R3-216ENST00000529172 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
PPP6R3-216ENST00000529172 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
PPP6R3-216ENST00000529172 ADRA2BP18089 450 aa16.3■□□□□ 0.2
PPP6R3-216ENST00000529172 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
PPP6R3-216ENST00000529172 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
PPP6R3-216ENST00000529172 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
PPP6R3-216ENST00000529172 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
PPP6R3-216ENST00000529172 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
PPP6R3-216ENST00000529172 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
PPP6R3-216ENST00000529172 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
PPP6R3-216ENST00000529172 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
PPP6R3-216ENST00000529172 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
PPP6R3-216ENST00000529172 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
PPP6R3-216ENST00000529172 C1QBPQ07021 282 aaKnown RBP14.15□□□□□ -0.14
PPP6R3-216ENST00000529172 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
PPP6R3-216ENST00000529172 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
PPP6R3-216ENST00000529172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.221e-8■■□□□ 13.2
PPP6R3-216ENST00000529172 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
PPP6R3-216ENST00000529172 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
PPP6R3-216ENST00000529172 DSG3P32926 999 aa13.33□□□□□ -0.28
PPP6R3-216ENST00000529172 POTEHQ6S545 545 aa13.33□□□□□ -0.28
PPP6R3-216ENST00000529172 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
PPP6R3-216ENST00000529172 CAPN15O75808 1086 aa13.24□□□□□ -0.29
PPP6R3-216ENST00000529172 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
PPP6R3-216ENST00000529172 APLP2Q06481 763 aa12.97□□□□□ -0.33
PPP6R3-216ENST00000529172 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
PPP6R3-216ENST00000529172 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
PPP6R3-216ENST00000529172 KCNA4P22459 653 aa12.9□□□□□ -0.34
PPP6R3-216ENST00000529172 ABCB7O75027 752 aa12.89□□□□□ -0.35
PPP6R3-216ENST00000529172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
PPP6R3-216ENST00000529172 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
PPP6R3-216ENST00000529172 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
PPP6R3-216ENST00000529172 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
PPP6R3-216ENST00000529172 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
PPP6R3-216ENST00000529172 POLA2Q14181 598 aa12.53□□□□□ -0.4
PPP6R3-216ENST00000529172 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
PPP6R3-216ENST00000529172 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
PPP6R3-216ENST00000529172 SP7Q8TDD2 431 aaPredicted RBP12.32□□□□□ -0.44
PPP6R3-216ENST00000529172 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
PPP6R3-216ENST00000529172 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
PPP6R3-216ENST00000529172 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
PPP6R3-216ENST00000529172 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
PPP6R3-216ENST00000529172 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
PPP6R3-216ENST00000529172 OSCARQ8IYS5 282 aa12.14□□□□□ -0.47
PPP6R3-216ENST00000529172 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
PPP6R3-216ENST00000529172 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
PPP6R3-216ENST00000529172 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
PPP6R3-216ENST00000529172 HAX1O00165 279 aa12.03□□□□□ -0.48
PPP6R3-216ENST00000529172 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
PPP6R3-216ENST00000529172 EVX2Q03828 476 aa11.91□□□□□ -0.5
PPP6R3-216ENST00000529172 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
PPP6R3-216ENST00000529172 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
PPP6R3-216ENST00000529172 ZBTB22O15209 634 aa11.88□□□□□ -0.51
PPP6R3-216ENST00000529172 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
PPP6R3-216ENST00000529172 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
PPP6R3-216ENST00000529172 FBLN2P98095 1184 aa11.78□□□□□ -0.52
PPP6R3-216ENST00000529172 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
PPP6R3-216ENST00000529172 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
PPP6R3-216ENST00000529172 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
PPP6R3-216ENST00000529172 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
PPP6R3-216ENST00000529172 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
PPP6R3-216ENST00000529172 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
PPP6R3-216ENST00000529172 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
PPP6R3-216ENST00000529172 GABBR2O75899 941 aa11.61□□□□□ -0.55
PPP6R3-216ENST00000529172 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
PPP6R3-216ENST00000529172 LHX8Q68G74 356 aa11.53□□□□□ -0.56
PPP6R3-216ENST00000529172 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
PPP6R3-216ENST00000529172 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
PPP6R3-216ENST00000529172 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
PPP6R3-216ENST00000529172 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
PPP6R3-216ENST00000529172 CLCN6P51797 869 aa11.37□□□□□ -0.59
PPP6R3-216ENST00000529172 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
PPP6R3-216ENST00000529172 FARP1Q9Y4F1 1045 aaPredicted RBP11.35□□□□□ -0.59
PPP6R3-216ENST00000529172 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
PPP6R3-216ENST00000529172 DCBLD2Q96PD2 775 aa11.18□□□□□ -0.62
PPP6R3-216ENST00000529172 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
PPP6R3-216ENST00000529172 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
PPP6R3-216ENST00000529172 STAG3Q9UJ98 1225 aa11.08□□□□□ -0.64
PPP6R3-216ENST00000529172 GALR2O43603 387 aaPredicted RBP11.06□□□□□ -0.64
PPP6R3-216ENST00000529172 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
PPP6R3-216ENST00000529172 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
PPP6R3-216ENST00000529172 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
PPP6R3-216ENST00000529172 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
PPP6R3-216ENST00000529172 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
PPP6R3-216ENST00000529172 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
PPP6R3-216ENST00000529172 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
PPP6R3-216ENST00000529172 PELP1Q8IZL8 1130 aaKnown RBP10.9□□□□□ -0.66
PPP6R3-216ENST00000529172 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
PPP6R3-216ENST00000529172 POTEMA6NI47 508 aa10.86□□□□□ -0.67
PPP6R3-216ENST00000529172 ASTLQ6HA08 431 aaPredicted RBP10.85□□□□□ -0.67
PPP6R3-216ENST00000529172 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
PPP6R3-216ENST00000529172 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms