RNA–Protein interactions for RNA: ENST00000529135.1

LINC00964-205, long intergenic non-protein coding RNA 964, humanhuman

TSL 3

Gene LINC00964, Length 495 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-205ENST00000529135 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
LINC00964-205ENST00000529135 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
LINC00964-205ENST00000529135 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
LINC00964-205ENST00000529135 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
LINC00964-205ENST00000529135 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
LINC00964-205ENST00000529135 FOXD1Q16676 465 aa12.59□□□□□ -0.39
LINC00964-205ENST00000529135 ADRA2BP18089 450 aa12.32□□□□□ -0.44
LINC00964-205ENST00000529135 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
LINC00964-205ENST00000529135 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
LINC00964-205ENST00000529135 KCNA4P22459 653 aa11.82□□□□□ -0.52
LINC00964-205ENST00000529135 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
LINC00964-205ENST00000529135 MSH5O43196 834 aa11.61□□□□□ -0.55
LINC00964-205ENST00000529135 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
LINC00964-205ENST00000529135 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
LINC00964-205ENST00000529135 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
LINC00964-205ENST00000529135 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
LINC00964-205ENST00000529135 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
LINC00964-205ENST00000529135 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
LINC00964-205ENST00000529135 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
LINC00964-205ENST00000529135 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
LINC00964-205ENST00000529135 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
LINC00964-205ENST00000529135 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
LINC00964-205ENST00000529135 ZBTB22O15209 634 aa10.88□□□□□ -0.67
LINC00964-205ENST00000529135 DMRT2Q9Y5R5 561 aa10.88□□□□□ -0.67
LINC00964-205ENST00000529135 HOXD11P31277 338 aaPredicted RBP10.79□□□□□ -0.68
LINC00964-205ENST00000529135 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
LINC00964-205ENST00000529135 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
LINC00964-205ENST00000529135 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
LINC00964-205ENST00000529135 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
LINC00964-205ENST00000529135 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
LINC00964-205ENST00000529135 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
LINC00964-205ENST00000529135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00964-205ENST00000529135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.17□□□□□ -0.78
LINC00964-205ENST00000529135 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
LINC00964-205ENST00000529135 SAMD1Q6SPF0 538 aaPredicted RBP10.14□□□□□ -0.79
LINC00964-205ENST00000529135 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
LINC00964-205ENST00000529135 ATF5Q9Y2D1 282 aaPredicted RBP10.11□□□□□ -0.79
LINC00964-205ENST00000529135 FKBP8Q14318 412 aa10.03□□□□□ -0.8
LINC00964-205ENST00000529135 APLP2Q06481 763 aa9.99□□□□□ -0.81
LINC00964-205ENST00000529135 ZNF219Q9P2Y4 722 aaPredicted RBP9.92□□□□□ -0.82
LINC00964-205ENST00000529135 RNF39Q9H2S5 420 aa9.9□□□□□ -0.82
LINC00964-205ENST00000529135 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
LINC00964-205ENST00000529135 C1QBPQ07021 282 aaKnown RBP9.82□□□□□ -0.84
LINC00964-205ENST00000529135 CAPN15O75808 1086 aa9.81□□□□□ -0.84
LINC00964-205ENST00000529135 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
LINC00964-205ENST00000529135 TRHP20396 242 aaPredicted RBP9.8□□□□□ -0.84
LINC00964-205ENST00000529135 SPINK5Q9NQ38 1064 aaPredicted RBP9.77□□□□□ -0.85
LINC00964-205ENST00000529135 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.86
LINC00964-205ENST00000529135 CACNB1Q02641 598 aaPredicted RBP9.7□□□□□ -0.86
LINC00964-205ENST00000529135 FBLN2P98095 1184 aa9.67□□□□□ -0.86
LINC00964-205ENST00000529135 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
LINC00964-205ENST00000529135 POLA2Q14181 598 aa9.65□□□□□ -0.86
LINC00964-205ENST00000529135 ABCB7O75027 752 aa9.62□□□□□ -0.87
LINC00964-205ENST00000529135 PROM2Q8N271 834 aa9.61□□□□□ -0.87
LINC00964-205ENST00000529135 FBXO3Q9UK99 471 aa9.61□□□□□ -0.87
LINC00964-205ENST00000529135 ZBTB12Q9Y330 459 aaPredicted RBP9.56□□□□□ -0.88
LINC00964-205ENST00000529135 SLC24A1O60721 1099 aa9.52□□□□□ -0.89
LINC00964-205ENST00000529135 DSG3P32926 999 aa9.5□□□□□ -0.89
LINC00964-205ENST00000529135 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
LINC00964-205ENST00000529135 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
LINC00964-205ENST00000529135 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
LINC00964-205ENST00000529135 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
LINC00964-205ENST00000529135 SPDYE2Q495Y8 402 aa9.33□□□□□ -0.92
LINC00964-205ENST00000529135 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
LINC00964-205ENST00000529135 OSCARQ8IYS5 282 aa9.31□□□□□ -0.92
LINC00964-205ENST00000529135 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
LINC00964-205ENST00000529135 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
LINC00964-205ENST00000529135 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00964-205ENST00000529135 PKD2Q13563 968 aa9.19□□□□□ -0.94
LINC00964-205ENST00000529135 KLHL34Q8N239 644 aa9.18□□□□□ -0.94
LINC00964-205ENST00000529135 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
LINC00964-205ENST00000529135 PLCD3Q8N3E9 789 aa9.14□□□□□ -0.95
LINC00964-205ENST00000529135 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
LINC00964-205ENST00000529135 MIER1Q8N108 512 aa9.12□□□□□ -0.95
LINC00964-205ENST00000529135 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
LINC00964-205ENST00000529135 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
LINC00964-205ENST00000529135 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
LINC00964-205ENST00000529135 PLEKHG5O94827 1062 aa9.05□□□□□ -0.96
LINC00964-205ENST00000529135 ZBTB47Q9UFB7 747 aaPredicted RBP9.05□□□□□ -0.96
LINC00964-205ENST00000529135 AKT1S1Q96B36 256 aa9.01□□□□□ -0.97
LINC00964-205ENST00000529135 SPDYE1Q8NFV5 336 aaPredicted RBP8.96□□□□□ -0.98
LINC00964-205ENST00000529135 CLEC11AQ9Y240 323 aa8.96□□□□□ -0.98
LINC00964-205ENST00000529135 RGL2O15211 777 aa8.95□□□□□ -0.98
LINC00964-205ENST00000529135 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
LINC00964-205ENST00000529135 HAP1P54257 671 aaPredicted RBP8.94□□□□□ -0.98
LINC00964-205ENST00000529135 CIZ1Q9ULV3 898 aaPredicted RBP8.94□□□□□ -0.98
LINC00964-205ENST00000529135 TRIM41Q8WV44 630 aa8.93□□□□□ -0.98
LINC00964-205ENST00000529135 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
LINC00964-205ENST00000529135 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.92□□□□□ -0.98
LINC00964-205ENST00000529135 REM2Q8IYK8 340 aaPredicted RBP8.91□□□□□ -0.98
LINC00964-205ENST00000529135 PRR29P0C7W0 189 aa8.87□□□□□ -0.99
LINC00964-205ENST00000529135 NUBP1P53384 320 aa8.87□□□□□ -0.99
LINC00964-205ENST00000529135 GSE1Q14687 1217 aa8.87□□□□□ -0.99
LINC00964-205ENST00000529135 VSIG10Q8N0Z9 540 aa8.86□□□□□ -0.99
LINC00964-205ENST00000529135 CREBZFQ9NS37 354 aa8.85□□□□□ -0.99
LINC00964-205ENST00000529135 PAXIP1Q6ZW49 1069 aaPredicted RBP8.84□□□□□ -0.99
LINC00964-205ENST00000529135 MNX1P50219 401 aaPredicted RBP8.82□□□□□ -1
LINC00964-205ENST00000529135 PITPNM1O00562 1244 aa8.81□□□□□ -1
LINC00964-205ENST00000529135 CHGAP10645 457 aaKnown RBP8.81□□□□□ -1
LINC00964-205ENST00000529135 CFAP44Q96MT7 982 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 468.5 ms