RNA–Protein interactions for RNA: ENST00000528197.5

CDKL1-205, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 4

Gene CDKL1, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-205ENST00000528197 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
CDKL1-205ENST00000528197 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
CDKL1-205ENST00000528197 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
CDKL1-205ENST00000528197 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
CDKL1-205ENST00000528197 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
CDKL1-205ENST00000528197 FOXD1Q16676 465 aa18.79■□□□□ 0.6
CDKL1-205ENST00000528197 ADRA2BP18089 450 aa18.18■□□□□ 0.5
CDKL1-205ENST00000528197 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
CDKL1-205ENST00000528197 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
CDKL1-205ENST00000528197 MSH5O43196 834 aa17.39■□□□□ 0.37
CDKL1-205ENST00000528197 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
CDKL1-205ENST00000528197 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
CDKL1-205ENST00000528197 KCNA4P22459 653 aa16.65■□□□□ 0.26
CDKL1-205ENST00000528197 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
CDKL1-205ENST00000528197 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
CDKL1-205ENST00000528197 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
CDKL1-205ENST00000528197 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
CDKL1-205ENST00000528197 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
CDKL1-205ENST00000528197 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
CDKL1-205ENST00000528197 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
CDKL1-205ENST00000528197 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
CDKL1-205ENST00000528197 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
CDKL1-205ENST00000528197 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
CDKL1-205ENST00000528197 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
CDKL1-205ENST00000528197 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
CDKL1-205ENST00000528197 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
CDKL1-205ENST00000528197 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
CDKL1-205ENST00000528197 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
CDKL1-205ENST00000528197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDKL1-205ENST00000528197 ZBTB22O15209 634 aa15.26■□□□□ 0.03
CDKL1-205ENST00000528197 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
CDKL1-205ENST00000528197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
CDKL1-205ENST00000528197 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
CDKL1-205ENST00000528197 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
CDKL1-205ENST00000528197 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
CDKL1-205ENST00000528197 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
CDKL1-205ENST00000528197 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
CDKL1-205ENST00000528197 APLP2Q06481 763 aa14.82□□□□□ -0.04
CDKL1-205ENST00000528197 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
CDKL1-205ENST00000528197 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
CDKL1-205ENST00000528197 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
CDKL1-205ENST00000528197 CAPN15O75808 1086 aa14.49□□□□□ -0.09
CDKL1-205ENST00000528197 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
CDKL1-205ENST00000528197 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
CDKL1-205ENST00000528197 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
CDKL1-205ENST00000528197 POLA2Q14181 598 aa14.24□□□□□ -0.13
CDKL1-205ENST00000528197 ABCB7O75027 752 aa14.17□□□□□ -0.14
CDKL1-205ENST00000528197 DSG3P32926 999 aa14.16□□□□□ -0.14
CDKL1-205ENST00000528197 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
CDKL1-205ENST00000528197 FBLN2P98095 1184 aa14.1□□□□□ -0.15
CDKL1-205ENST00000528197 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
CDKL1-205ENST00000528197 FKBP8Q14318 412 aa13.91□□□□□ -0.18
CDKL1-205ENST00000528197 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
CDKL1-205ENST00000528197 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
CDKL1-205ENST00000528197 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
CDKL1-205ENST00000528197 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
CDKL1-205ENST00000528197 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
CDKL1-205ENST00000528197 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
CDKL1-205ENST00000528197 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
CDKL1-205ENST00000528197 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
CDKL1-205ENST00000528197 PROM2Q8N271 834 aa13.52□□□□□ -0.25
CDKL1-205ENST00000528197 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
CDKL1-205ENST00000528197 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDKL1-205ENST00000528197 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
CDKL1-205ENST00000528197 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
CDKL1-205ENST00000528197 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
CDKL1-205ENST00000528197 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
CDKL1-205ENST00000528197 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
CDKL1-205ENST00000528197 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
CDKL1-205ENST00000528197 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
CDKL1-205ENST00000528197 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
CDKL1-205ENST00000528197 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
CDKL1-205ENST00000528197 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CDKL1-205ENST00000528197 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
CDKL1-205ENST00000528197 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
CDKL1-205ENST00000528197 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
CDKL1-205ENST00000528197 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
CDKL1-205ENST00000528197 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
CDKL1-205ENST00000528197 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
CDKL1-205ENST00000528197 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
CDKL1-205ENST00000528197 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
CDKL1-205ENST00000528197 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
CDKL1-205ENST00000528197 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDKL1-205ENST00000528197 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDKL1-205ENST00000528197 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CDKL1-205ENST00000528197 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
CDKL1-205ENST00000528197 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
CDKL1-205ENST00000528197 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
CDKL1-205ENST00000528197 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
CDKL1-205ENST00000528197 GSE1Q14687 1217 aa12.67□□□□□ -0.38
CDKL1-205ENST00000528197 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
CDKL1-205ENST00000528197 NUBP1P53384 320 aa12.66□□□□□ -0.38
CDKL1-205ENST00000528197 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
CDKL1-205ENST00000528197 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
CDKL1-205ENST00000528197 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
CDKL1-205ENST00000528197 PKD2Q13563 968 aa12.6□□□□□ -0.39
CDKL1-205ENST00000528197 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
CDKL1-205ENST00000528197 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
CDKL1-205ENST00000528197 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
CDKL1-205ENST00000528197 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms