RNA–Protein interactions for RNA: ENST00000527508.1

ACER3-206, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 531 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-206ENST00000527508 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
ACER3-206ENST00000527508 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
ACER3-206ENST00000527508 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
ACER3-206ENST00000527508 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
ACER3-206ENST00000527508 FOXD1Q16676 465 aa18.12■□□□□ 0.49
ACER3-206ENST00000527508 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
ACER3-206ENST00000527508 MSH5O43196 834 aa17.05■□□□□ 0.32
ACER3-206ENST00000527508 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
ACER3-206ENST00000527508 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
ACER3-206ENST00000527508 ADRA2BP18089 450 aa16.79■□□□□ 0.28
ACER3-206ENST00000527508 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
ACER3-206ENST00000527508 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
ACER3-206ENST00000527508 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
ACER3-206ENST00000527508 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
ACER3-206ENST00000527508 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
ACER3-206ENST00000527508 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
ACER3-206ENST00000527508 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
ACER3-206ENST00000527508 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
ACER3-206ENST00000527508 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
ACER3-206ENST00000527508 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
ACER3-206ENST00000527508 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
ACER3-206ENST00000527508 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
ACER3-206ENST00000527508 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
ACER3-206ENST00000527508 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
ACER3-206ENST00000527508 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
ACER3-206ENST00000527508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
ACER3-206ENST00000527508 KCNA4P22459 653 aa13.87□□□□□ -0.19
ACER3-206ENST00000527508 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
ACER3-206ENST00000527508 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
ACER3-206ENST00000527508 CAPN15O75808 1086 aa13.59□□□□□ -0.23
ACER3-206ENST00000527508 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
ACER3-206ENST00000527508 DSG3P32926 999 aa13.55□□□□□ -0.24
ACER3-206ENST00000527508 APLP2Q06481 763 aa13.5□□□□□ -0.25
ACER3-206ENST00000527508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
ACER3-206ENST00000527508 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
ACER3-206ENST00000527508 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
ACER3-206ENST00000527508 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
ACER3-206ENST00000527508 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
ACER3-206ENST00000527508 ABCB7O75027 752 aa13.23□□□□□ -0.29
ACER3-206ENST00000527508 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
ACER3-206ENST00000527508 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
ACER3-206ENST00000527508 POTEHQ6S545 545 aa13.08□□□□□ -0.32
ACER3-206ENST00000527508 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
ACER3-206ENST00000527508 POLA2Q14181 598 aa12.99□□□□□ -0.33
ACER3-206ENST00000527508 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
ACER3-206ENST00000527508 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
ACER3-206ENST00000527508 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
ACER3-206ENST00000527508 ZBTB22O15209 634 aa12.73□□□□□ -0.37
ACER3-206ENST00000527508 ATXN8OSP0DMR3 200 aa12.68□□□□□ -0.38
ACER3-206ENST00000527508 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
ACER3-206ENST00000527508 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
ACER3-206ENST00000527508 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
ACER3-206ENST00000527508 REM2Q8IYK8 340 aaPredicted RBP12.5□□□□□ -0.41
ACER3-206ENST00000527508 FBLN2P98095 1184 aa12.42□□□□□ -0.42
ACER3-206ENST00000527508 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
ACER3-206ENST00000527508 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
ACER3-206ENST00000527508 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
ACER3-206ENST00000527508 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
ACER3-206ENST00000527508 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
ACER3-206ENST00000527508 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
ACER3-206ENST00000527508 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
ACER3-206ENST00000527508 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
ACER3-206ENST00000527508 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
ACER3-206ENST00000527508 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
ACER3-206ENST00000527508 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
ACER3-206ENST00000527508 HAX1O00165 279 aa12.14□□□□□ -0.47
ACER3-206ENST00000527508 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
ACER3-206ENST00000527508 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
ACER3-206ENST00000527508 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
ACER3-206ENST00000527508 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
ACER3-206ENST00000527508 EVX2Q03828 476 aa11.95□□□□□ -0.5
ACER3-206ENST00000527508 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
ACER3-206ENST00000527508 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
ACER3-206ENST00000527508 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
ACER3-206ENST00000527508 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
ACER3-206ENST00000527508 GABBR2O75899 941 aa11.72□□□□□ -0.53
ACER3-206ENST00000527508 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
ACER3-206ENST00000527508 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
ACER3-206ENST00000527508 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
ACER3-206ENST00000527508 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
ACER3-206ENST00000527508 CLCN6P51797 869 aa11.64□□□□□ -0.55
ACER3-206ENST00000527508 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
ACER3-206ENST00000527508 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
ACER3-206ENST00000527508 LHX8Q68G74 356 aa11.48□□□□□ -0.57
ACER3-206ENST00000527508 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
ACER3-206ENST00000527508 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
ACER3-206ENST00000527508 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
ACER3-206ENST00000527508 PAK3O75914 559 aaPredicted RBP11.41□□□□□ -0.58
ACER3-206ENST00000527508 PROM2Q8N271 834 aa11.41□□□□□ -0.58
ACER3-206ENST00000527508 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
ACER3-206ENST00000527508 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
ACER3-206ENST00000527508 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
ACER3-206ENST00000527508 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
ACER3-206ENST00000527508 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
ACER3-206ENST00000527508 MS4A3Q96HJ5 214 aa11.14□□□□□ -0.63
ACER3-206ENST00000527508 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
ACER3-206ENST00000527508 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
ACER3-206ENST00000527508 MIER1Q8N108 512 aa11.13□□□□□ -0.63
ACER3-206ENST00000527508 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
ACER3-206ENST00000527508 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms