RNA–Protein interactions for RNA: ENST00000527390.1

USP33-214, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-214ENST00000527390 AEBP2Q6ZN18 517 aaPredicted RBP30.1■■■□□ 2.41
USP33-214ENST00000527390 CHIC1Q5VXU3 224 aa28.61■■■□□ 2.17
USP33-214ENST00000527390 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
USP33-214ENST00000527390 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
USP33-214ENST00000527390 FOXD1Q16676 465 aa23.89■■□□□ 1.41
USP33-214ENST00000527390 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
USP33-214ENST00000527390 PPP6R1Q9UPN7 881 aa22.44■■□□□ 1.18
USP33-214ENST00000527390 ADRA2BP18089 450 aa22.39■■□□□ 1.17
USP33-214ENST00000527390 PIAS4Q8N2W9 510 aaPredicted RBP22.37■■□□□ 1.17
USP33-214ENST00000527390 MSH5O43196 834 aa22.24■■□□□ 1.15
USP33-214ENST00000527390 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
USP33-214ENST00000527390 MAPK8IP2Q13387 824 aaPredicted RBP20.55■□□□□ 0.88
USP33-214ENST00000527390 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
USP33-214ENST00000527390 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
USP33-214ENST00000527390 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
USP33-214ENST00000527390 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
USP33-214ENST00000527390 DCAF8L1A6NGE4 600 aa19.6■□□□□ 0.73
USP33-214ENST00000527390 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
USP33-214ENST00000527390 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
USP33-214ENST00000527390 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
USP33-214ENST00000527390 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
USP33-214ENST00000527390 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
USP33-214ENST00000527390 RNF39Q9H2S5 420 aa19.01■□□□□ 0.63
USP33-214ENST00000527390 KCNA4P22459 653 aa18.86■□□□□ 0.61
USP33-214ENST00000527390 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
USP33-214ENST00000527390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
USP33-214ENST00000527390 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
USP33-214ENST00000527390 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
USP33-214ENST00000527390 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
USP33-214ENST00000527390 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
USP33-214ENST00000527390 CAPN15O75808 1086 aa18.04■□□□□ 0.48
USP33-214ENST00000527390 DSG3P32926 999 aa17.86■□□□□ 0.45
USP33-214ENST00000527390 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
USP33-214ENST00000527390 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
USP33-214ENST00000527390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
USP33-214ENST00000527390 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
USP33-214ENST00000527390 APLP2Q06481 763 aa17.72■□□□□ 0.43
USP33-214ENST00000527390 ABCB7O75027 752 aa17.69■□□□□ 0.42
USP33-214ENST00000527390 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
USP33-214ENST00000527390 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
USP33-214ENST00000527390 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
USP33-214ENST00000527390 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
USP33-214ENST00000527390 ZBTB22O15209 634 aa17.36■□□□□ 0.37
USP33-214ENST00000527390 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
USP33-214ENST00000527390 POLA2Q14181 598 aa17.29■□□□□ 0.36
USP33-214ENST00000527390 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
USP33-214ENST00000527390 POTEHQ6S545 545 aa16.96■□□□□ 0.31
USP33-214ENST00000527390 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
USP33-214ENST00000527390 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
USP33-214ENST00000527390 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
USP33-214ENST00000527390 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
USP33-214ENST00000527390 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
USP33-214ENST00000527390 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
USP33-214ENST00000527390 FBLN2P98095 1184 aa16.54■□□□□ 0.24
USP33-214ENST00000527390 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
USP33-214ENST00000527390 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
USP33-214ENST00000527390 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
USP33-214ENST00000527390 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
USP33-214ENST00000527390 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
USP33-214ENST00000527390 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
USP33-214ENST00000527390 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
USP33-214ENST00000527390 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
USP33-214ENST00000527390 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
USP33-214ENST00000527390 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
USP33-214ENST00000527390 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
USP33-214ENST00000527390 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
USP33-214ENST00000527390 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
USP33-214ENST00000527390 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
USP33-214ENST00000527390 HAX1O00165 279 aa15.97■□□□□ 0.15
USP33-214ENST00000527390 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
USP33-214ENST00000527390 SP7Q8TDD2 431 aaPredicted RBP15.93■□□□□ 0.14
USP33-214ENST00000527390 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
USP33-214ENST00000527390 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
USP33-214ENST00000527390 EVX2Q03828 476 aa15.81■□□□□ 0.12
USP33-214ENST00000527390 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
USP33-214ENST00000527390 C19orf67A6NJJ6 358 aa15.63■□□□□ 0.09
USP33-214ENST00000527390 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
USP33-214ENST00000527390 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
USP33-214ENST00000527390 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
USP33-214ENST00000527390 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
USP33-214ENST00000527390 GABBR2O75899 941 aa15.41■□□□□ 0.06
USP33-214ENST00000527390 PROM2Q8N271 834 aa15.29■□□□□ 0.04
USP33-214ENST00000527390 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
USP33-214ENST00000527390 MNX1P50219 401 aaPredicted RBP15.19■□□□□ 0.02
USP33-214ENST00000527390 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
USP33-214ENST00000527390 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP33-214ENST00000527390 POTEIP0CG38 1075 aa15.11■□□□□ 0.01
USP33-214ENST00000527390 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
USP33-214ENST00000527390 FKBP8Q14318 412 aa15.1■□□□□ 0.01
USP33-214ENST00000527390 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
USP33-214ENST00000527390 GALR2O43603 387 aaPredicted RBP15.05■□□□□ -0
USP33-214ENST00000527390 CLCN6P51797 869 aa15.02■□□□□ -0
USP33-214ENST00000527390 MIER1Q8N108 512 aa15.01□□□□□ -0.01
USP33-214ENST00000527390 DCBLD2Q96PD2 775 aa15.01□□□□□ -0.01
USP33-214ENST00000527390 TSPYL2Q9H2G4 693 aaPredicted RBP14.98□□□□□ -0.01
USP33-214ENST00000527390 LHX8Q68G74 356 aa14.95□□□□□ -0.02
USP33-214ENST00000527390 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
USP33-214ENST00000527390 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
USP33-214ENST00000527390 MS4A3Q96HJ5 214 aa14.87□□□□□ -0.03
USP33-214ENST00000527390 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms