RNA–Protein interactions for RNA: ENST00000527198.1

BCO2-209, Transcript of beta-carotene oxygenase 2, humanhuman

TSL 3

Gene BCO2, Length 541 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCO2-209ENST00000527198 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
BCO2-209ENST00000527198 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
BCO2-209ENST00000527198 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
BCO2-209ENST00000527198 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
BCO2-209ENST00000527198 FOXD1Q16676 465 aa22.72■■□□□ 1.23
BCO2-209ENST00000527198 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
BCO2-209ENST00000527198 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
BCO2-209ENST00000527198 ADRA2BP18089 450 aa21.46■■□□□ 1.03
BCO2-209ENST00000527198 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
BCO2-209ENST00000527198 MSH5O43196 834 aa21.15■□□□□ 0.98
BCO2-209ENST00000527198 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
BCO2-209ENST00000527198 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
BCO2-209ENST00000527198 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
BCO2-209ENST00000527198 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
BCO2-209ENST00000527198 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
BCO2-209ENST00000527198 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
BCO2-209ENST00000527198 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
BCO2-209ENST00000527198 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
BCO2-209ENST00000527198 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
BCO2-209ENST00000527198 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
BCO2-209ENST00000527198 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
BCO2-209ENST00000527198 KCNA4P22459 653 aa18.44■□□□□ 0.54
BCO2-209ENST00000527198 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
BCO2-209ENST00000527198 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
BCO2-209ENST00000527198 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
BCO2-209ENST00000527198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
BCO2-209ENST00000527198 C1QBPQ07021 282 aaKnown RBP17.83■□□□□ 0.44
BCO2-209ENST00000527198 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
BCO2-209ENST00000527198 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
BCO2-209ENST00000527198 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
BCO2-209ENST00000527198 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
BCO2-209ENST00000527198 CAPN15O75808 1086 aa17.25■□□□□ 0.35
BCO2-209ENST00000527198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
BCO2-209ENST00000527198 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
BCO2-209ENST00000527198 APLP2Q06481 763 aa17.14■□□□□ 0.33
BCO2-209ENST00000527198 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
BCO2-209ENST00000527198 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
BCO2-209ENST00000527198 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
BCO2-209ENST00000527198 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
BCO2-209ENST00000527198 DSG3P32926 999 aa17.03■□□□□ 0.32
BCO2-209ENST00000527198 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
BCO2-209ENST00000527198 ZBTB22O15209 634 aa16.94■□□□□ 0.3
BCO2-209ENST00000527198 ABCB7O75027 752 aa16.88■□□□□ 0.29
BCO2-209ENST00000527198 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
BCO2-209ENST00000527198 POLA2Q14181 598 aa16.65■□□□□ 0.26
BCO2-209ENST00000527198 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
BCO2-209ENST00000527198 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
BCO2-209ENST00000527198 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
BCO2-209ENST00000527198 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
BCO2-209ENST00000527198 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
BCO2-209ENST00000527198 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
BCO2-209ENST00000527198 FBLN2P98095 1184 aa16.06■□□□□ 0.16
BCO2-209ENST00000527198 MKRN4PQ13434 485 aaPredicted RBP15.94■□□□□ 0.14
BCO2-209ENST00000527198 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
BCO2-209ENST00000527198 POTEHQ6S545 545 aa15.85■□□□□ 0.13
BCO2-209ENST00000527198 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
BCO2-209ENST00000527198 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
BCO2-209ENST00000527198 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
BCO2-209ENST00000527198 REM2Q8IYK8 340 aaPredicted RBP15.8■□□□□ 0.12
BCO2-209ENST00000527198 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
BCO2-209ENST00000527198 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
BCO2-209ENST00000527198 PITPNM1O00562 1244 aa15.62■□□□□ 0.09
BCO2-209ENST00000527198 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
BCO2-209ENST00000527198 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
BCO2-209ENST00000527198 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
BCO2-209ENST00000527198 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
BCO2-209ENST00000527198 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
BCO2-209ENST00000527198 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
BCO2-209ENST00000527198 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
BCO2-209ENST00000527198 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
BCO2-209ENST00000527198 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
BCO2-209ENST00000527198 HAX1O00165 279 aa15.16■□□□□ 0.02
BCO2-209ENST00000527198 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
BCO2-209ENST00000527198 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
BCO2-209ENST00000527198 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
BCO2-209ENST00000527198 PROM2Q8N271 834 aa14.97□□□□□ -0.01
BCO2-209ENST00000527198 EVX2Q03828 476 aa14.95□□□□□ -0.02
BCO2-209ENST00000527198 FKBP8Q14318 412 aa14.93□□□□□ -0.02
BCO2-209ENST00000527198 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
BCO2-209ENST00000527198 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
BCO2-209ENST00000527198 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
BCO2-209ENST00000527198 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
BCO2-209ENST00000527198 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
BCO2-209ENST00000527198 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
BCO2-209ENST00000527198 MIER1Q8N108 512 aa14.67□□□□□ -0.06
BCO2-209ENST00000527198 GABBR2O75899 941 aa14.64□□□□□ -0.07
BCO2-209ENST00000527198 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
BCO2-209ENST00000527198 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
BCO2-209ENST00000527198 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
BCO2-209ENST00000527198 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
BCO2-209ENST00000527198 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
BCO2-209ENST00000527198 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
BCO2-209ENST00000527198 CLCN6P51797 869 aa14.47□□□□□ -0.09
BCO2-209ENST00000527198 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
BCO2-209ENST00000527198 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
BCO2-209ENST00000527198 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
BCO2-209ENST00000527198 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
BCO2-209ENST00000527198 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
BCO2-209ENST00000527198 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
BCO2-209ENST00000527198 VASPP50552 380 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms