RNA–Protein interactions for RNA: ENST00000527181.1

ATM-210, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2

Gene ATM, Length 740 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-210ENST00000527181 AEBP2Q6ZN18 517 aaPredicted RBP26.84■■□□□ 1.89
ATM-210ENST00000527181 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
ATM-210ENST00000527181 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
ATM-210ENST00000527181 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
ATM-210ENST00000527181 FOXD1Q16676 465 aa21.36■■□□□ 1.01
ATM-210ENST00000527181 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
ATM-210ENST00000527181 MSH5O43196 834 aa20.07■□□□□ 0.8
ATM-210ENST00000527181 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
ATM-210ENST00000527181 ADRA2BP18089 450 aa20.01■□□□□ 0.79
ATM-210ENST00000527181 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
ATM-210ENST00000527181 POTEDQ86YR6 584 aa19.27■□□□□ 0.68
ATM-210ENST00000527181 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
ATM-210ENST00000527181 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
ATM-210ENST00000527181 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
ATM-210ENST00000527181 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
ATM-210ENST00000527181 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
ATM-210ENST00000527181 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
ATM-210ENST00000527181 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
ATM-210ENST00000527181 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
ATM-210ENST00000527181 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
ATM-210ENST00000527181 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
ATM-210ENST00000527181 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
ATM-210ENST00000527181 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
ATM-210ENST00000527181 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
ATM-210ENST00000527181 KCNA4P22459 653 aa16.91■□□□□ 0.3
ATM-210ENST00000527181 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
ATM-210ENST00000527181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
ATM-210ENST00000527181 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
ATM-210ENST00000527181 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
ATM-210ENST00000527181 CAPN15O75808 1086 aa16.21■□□□□ 0.19
ATM-210ENST00000527181 APLP2Q06481 763 aa16.19■□□□□ 0.18
ATM-210ENST00000527181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
ATM-210ENST00000527181 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
ATM-210ENST00000527181 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
ATM-210ENST00000527181 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
ATM-210ENST00000527181 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
ATM-210ENST00000527181 DSG3P32926 999 aa16■□□□□ 0.15
ATM-210ENST00000527181 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
ATM-210ENST00000527181 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
ATM-210ENST00000527181 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
ATM-210ENST00000527181 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
ATM-210ENST00000527181 ABCB7O75027 752 aa15.79■□□□□ 0.12
ATM-210ENST00000527181 POLA2Q14181 598 aa15.54■□□□□ 0.08
ATM-210ENST00000527181 ZBTB22O15209 634 aa15.48■□□□□ 0.07
ATM-210ENST00000527181 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
ATM-210ENST00000527181 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
ATM-210ENST00000527181 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
ATM-210ENST00000527181 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
ATM-210ENST00000527181 POTEHQ6S545 545 aa15.16■□□□□ 0.02
ATM-210ENST00000527181 FBLN2P98095 1184 aa15.02■□□□□ -0
ATM-210ENST00000527181 OSCARQ8IYS5 282 aa15.02■□□□□ -0
ATM-210ENST00000527181 AKT1S1Q96B36 256 aa15.02■□□□□ -0
ATM-210ENST00000527181 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
ATM-210ENST00000527181 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
ATM-210ENST00000527181 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
ATM-210ENST00000527181 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
ATM-210ENST00000527181 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
ATM-210ENST00000527181 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
ATM-210ENST00000527181 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
ATM-210ENST00000527181 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
ATM-210ENST00000527181 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
ATM-210ENST00000527181 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
ATM-210ENST00000527181 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
ATM-210ENST00000527181 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
ATM-210ENST00000527181 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
ATM-210ENST00000527181 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
ATM-210ENST00000527181 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
ATM-210ENST00000527181 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
ATM-210ENST00000527181 HAX1O00165 279 aa14.35□□□□□ -0.11
ATM-210ENST00000527181 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
ATM-210ENST00000527181 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
ATM-210ENST00000527181 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
ATM-210ENST00000527181 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
ATM-210ENST00000527181 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
ATM-210ENST00000527181 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
ATM-210ENST00000527181 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
ATM-210ENST00000527181 EVX2Q03828 476 aa14.01□□□□□ -0.17
ATM-210ENST00000527181 FARP1Q9Y4F1 1045 aaPredicted RBP13.98□□□□□ -0.17
ATM-210ENST00000527181 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
ATM-210ENST00000527181 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
ATM-210ENST00000527181 GABBR2O75899 941 aa13.81□□□□□ -0.2
ATM-210ENST00000527181 PROM2Q8N271 834 aa13.8□□□□□ -0.2
ATM-210ENST00000527181 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
ATM-210ENST00000527181 CLCN6P51797 869 aa13.76□□□□□ -0.21
ATM-210ENST00000527181 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
ATM-210ENST00000527181 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
ATM-210ENST00000527181 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
ATM-210ENST00000527181 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
ATM-210ENST00000527181 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
ATM-210ENST00000527181 FKBP8Q14318 412 aa13.6□□□□□ -0.23
ATM-210ENST00000527181 MIER1Q8N108 512 aa13.58□□□□□ -0.24
ATM-210ENST00000527181 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
ATM-210ENST00000527181 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
ATM-210ENST00000527181 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
ATM-210ENST00000527181 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
ATM-210ENST00000527181 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
ATM-210ENST00000527181 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
ATM-210ENST00000527181 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
ATM-210ENST00000527181 LHX8Q68G74 356 aa13.41□□□□□ -0.26
ATM-210ENST00000527181 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms