RNA–Protein interactions for RNA: ENST00000527124.1

FAM208B-211, Transcript of family with sequence similarity 208 member B, humanhuman

TSL 5

Gene FAM208B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-211ENST00000527124 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
FAM208B-211ENST00000527124 CHIC1Q5VXU3 224 aa27.14■■□□□ 1.94
FAM208B-211ENST00000527124 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
FAM208B-211ENST00000527124 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
FAM208B-211ENST00000527124 FOXD1Q16676 465 aa23.1■■□□□ 1.29
FAM208B-211ENST00000527124 POTEDQ86YR6 584 aa21.9■■□□□ 1.1
FAM208B-211ENST00000527124 MSH5O43196 834 aa21.83■■□□□ 1.09
FAM208B-211ENST00000527124 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
FAM208B-211ENST00000527124 PIAS4Q8N2W9 510 aaPredicted RBP21.45■■□□□ 1.02
FAM208B-211ENST00000527124 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
FAM208B-211ENST00000527124 ADRA2BP18089 450 aa21.14■□□□□ 0.97
FAM208B-211ENST00000527124 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
FAM208B-211ENST00000527124 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.72
FAM208B-211ENST00000527124 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
FAM208B-211ENST00000527124 CACNB1Q02641 598 aaPredicted RBP18.85■□□□□ 0.61
FAM208B-211ENST00000527124 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
FAM208B-211ENST00000527124 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
FAM208B-211ENST00000527124 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
FAM208B-211ENST00000527124 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
FAM208B-211ENST00000527124 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
FAM208B-211ENST00000527124 RNF216Q9NWF9 866 aaPredicted RBP18.5■□□□□ 0.55
FAM208B-211ENST00000527124 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
FAM208B-211ENST00000527124 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
FAM208B-211ENST00000527124 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
FAM208B-211ENST00000527124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
FAM208B-211ENST00000527124 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
FAM208B-211ENST00000527124 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
FAM208B-211ENST00000527124 DSG3P32926 999 aa17.24■□□□□ 0.35
FAM208B-211ENST00000527124 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
FAM208B-211ENST00000527124 CAPN15O75808 1086 aa17.15■□□□□ 0.34
FAM208B-211ENST00000527124 POTEHQ6S545 545 aa17.08■□□□□ 0.32
FAM208B-211ENST00000527124 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
FAM208B-211ENST00000527124 KCNA4P22459 653 aa16.99■□□□□ 0.31
FAM208B-211ENST00000527124 APLP2Q06481 763 aa16.9■□□□□ 0.3
FAM208B-211ENST00000527124 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
FAM208B-211ENST00000527124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
FAM208B-211ENST00000527124 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
FAM208B-211ENST00000527124 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
FAM208B-211ENST00000527124 ABCB7O75027 752 aa16.69■□□□□ 0.26
FAM208B-211ENST00000527124 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
FAM208B-211ENST00000527124 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
FAM208B-211ENST00000527124 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
FAM208B-211ENST00000527124 POLA2Q14181 598 aa16.27■□□□□ 0.2
FAM208B-211ENST00000527124 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
FAM208B-211ENST00000527124 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
FAM208B-211ENST00000527124 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
FAM208B-211ENST00000527124 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
FAM208B-211ENST00000527124 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
FAM208B-211ENST00000527124 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
FAM208B-211ENST00000527124 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
FAM208B-211ENST00000527124 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
FAM208B-211ENST00000527124 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
FAM208B-211ENST00000527124 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
FAM208B-211ENST00000527124 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
FAM208B-211ENST00000527124 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
FAM208B-211ENST00000527124 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
FAM208B-211ENST00000527124 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
FAM208B-211ENST00000527124 ZBTB22O15209 634 aa15.59■□□□□ 0.09
FAM208B-211ENST00000527124 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
FAM208B-211ENST00000527124 HAX1O00165 279 aa15.51■□□□□ 0.07
FAM208B-211ENST00000527124 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
FAM208B-211ENST00000527124 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
FAM208B-211ENST00000527124 SPDYE2Q495Y8 402 aa15.48■□□□□ 0.07
FAM208B-211ENST00000527124 FBLN2P98095 1184 aa15.38■□□□□ 0.05
FAM208B-211ENST00000527124 EVX2Q03828 476 aa15.32■□□□□ 0.04
FAM208B-211ENST00000527124 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
FAM208B-211ENST00000527124 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
FAM208B-211ENST00000527124 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
FAM208B-211ENST00000527124 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
FAM208B-211ENST00000527124 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
FAM208B-211ENST00000527124 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
FAM208B-211ENST00000527124 CLEC11AQ9Y240 323 aa15.14■□□□□ 0.01
FAM208B-211ENST00000527124 GABBR2O75899 941 aa14.99□□□□□ -0.01
FAM208B-211ENST00000527124 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
FAM208B-211ENST00000527124 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
FAM208B-211ENST00000527124 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
FAM208B-211ENST00000527124 LHX8Q68G74 356 aa14.83□□□□□ -0.04
FAM208B-211ENST00000527124 CLCN6P51797 869 aa14.76□□□□□ -0.05
FAM208B-211ENST00000527124 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
FAM208B-211ENST00000527124 CD44P16070 742 aaKnown RBP14.72□□□□□ -0.05
FAM208B-211ENST00000527124 POTEIP0CG38 1075 aa14.69□□□□□ -0.06
FAM208B-211ENST00000527124 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
FAM208B-211ENST00000527124 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
FAM208B-211ENST00000527124 CREBZFQ9NS37 354 aa14.49□□□□□ -0.09
FAM208B-211ENST00000527124 DCBLD2Q96PD2 775 aa14.46□□□□□ -0.09
FAM208B-211ENST00000527124 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
FAM208B-211ENST00000527124 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
FAM208B-211ENST00000527124 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
FAM208B-211ENST00000527124 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
FAM208B-211ENST00000527124 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
FAM208B-211ENST00000527124 OTUD5Q96G74 571 aa14.21□□□□□ -0.13
FAM208B-211ENST00000527124 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
FAM208B-211ENST00000527124 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
FAM208B-211ENST00000527124 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
FAM208B-211ENST00000527124 FKBP8Q14318 412 aa14.14□□□□□ -0.15
FAM208B-211ENST00000527124 ASTLQ6HA08 431 aaPredicted RBP14.09□□□□□ -0.15
FAM208B-211ENST00000527124 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
FAM208B-211ENST00000527124 PLSCR2Q9NRY7 297 aa14.06□□□□□ -0.16
FAM208B-211ENST00000527124 PROM2Q8N271 834 aa14.05□□□□□ -0.16
FAM208B-211ENST00000527124 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1391.8 ms