RNA–Protein interactions for RNA: ENST00000526872.2

ATXN3-214, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-214ENST00000526872 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
ATXN3-214ENST00000526872 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
ATXN3-214ENST00000526872 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
ATXN3-214ENST00000526872 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
ATXN3-214ENST00000526872 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
ATXN3-214ENST00000526872 FOXD1Q16676 465 aa20.53■□□□□ 0.88
ATXN3-214ENST00000526872 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
ATXN3-214ENST00000526872 ADRA2BP18089 450 aa19.84■□□□□ 0.77
ATXN3-214ENST00000526872 PIAS4Q8N2W9 510 aaPredicted RBP19.32■□□□□ 0.68
ATXN3-214ENST00000526872 MSH5O43196 834 aa18.77■□□□□ 0.6
ATXN3-214ENST00000526872 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
ATXN3-214ENST00000526872 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
ATXN3-214ENST00000526872 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
ATXN3-214ENST00000526872 KCNA4P22459 653 aa17.97■□□□□ 0.47
ATXN3-214ENST00000526872 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
ATXN3-214ENST00000526872 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
ATXN3-214ENST00000526872 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
ATXN3-214ENST00000526872 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
ATXN3-214ENST00000526872 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
ATXN3-214ENST00000526872 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
ATXN3-214ENST00000526872 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
ATXN3-214ENST00000526872 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
ATXN3-214ENST00000526872 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
ATXN3-214ENST00000526872 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
ATXN3-214ENST00000526872 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
ATXN3-214ENST00000526872 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
ATXN3-214ENST00000526872 ZBTB22O15209 634 aa16.57■□□□□ 0.24
ATXN3-214ENST00000526872 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
ATXN3-214ENST00000526872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATXN3-214ENST00000526872 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
ATXN3-214ENST00000526872 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
ATXN3-214ENST00000526872 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
ATXN3-214ENST00000526872 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
ATXN3-214ENST00000526872 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
ATXN3-214ENST00000526872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
ATXN3-214ENST00000526872 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
ATXN3-214ENST00000526872 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
ATXN3-214ENST00000526872 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
ATXN3-214ENST00000526872 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
ATXN3-214ENST00000526872 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
ATXN3-214ENST00000526872 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
ATXN3-214ENST00000526872 APLP2Q06481 763 aa15.69■□□□□ 0.1
ATXN3-214ENST00000526872 CAPN15O75808 1086 aa15.67■□□□□ 0.1
ATXN3-214ENST00000526872 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
ATXN3-214ENST00000526872 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
ATXN3-214ENST00000526872 ABCB7O75027 752 aa15.43■□□□□ 0.06
ATXN3-214ENST00000526872 DSG3P32926 999 aa15.43■□□□□ 0.06
ATXN3-214ENST00000526872 POLA2Q14181 598 aa15.41■□□□□ 0.06
ATXN3-214ENST00000526872 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
ATXN3-214ENST00000526872 FBLN2P98095 1184 aa15.02■□□□□ -0
ATXN3-214ENST00000526872 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
ATXN3-214ENST00000526872 FKBP8Q14318 412 aa14.87□□□□□ -0.03
ATXN3-214ENST00000526872 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
ATXN3-214ENST00000526872 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.05
ATXN3-214ENST00000526872 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
ATXN3-214ENST00000526872 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
ATXN3-214ENST00000526872 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
ATXN3-214ENST00000526872 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
ATXN3-214ENST00000526872 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
ATXN3-214ENST00000526872 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
ATXN3-214ENST00000526872 PROM2Q8N271 834 aa14.53□□□□□ -0.08
ATXN3-214ENST00000526872 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
ATXN3-214ENST00000526872 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
ATXN3-214ENST00000526872 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
ATXN3-214ENST00000526872 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
ATXN3-214ENST00000526872 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
ATXN3-214ENST00000526872 CLEC11AQ9Y240 323 aa14.22□□□□□ -0.13
ATXN3-214ENST00000526872 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
ATXN3-214ENST00000526872 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
ATXN3-214ENST00000526872 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
ATXN3-214ENST00000526872 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
ATXN3-214ENST00000526872 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
ATXN3-214ENST00000526872 MIER1Q8N108 512 aa14.01□□□□□ -0.17
ATXN3-214ENST00000526872 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-214ENST00000526872 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
ATXN3-214ENST00000526872 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
ATXN3-214ENST00000526872 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATXN3-214ENST00000526872 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
ATXN3-214ENST00000526872 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
ATXN3-214ENST00000526872 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
ATXN3-214ENST00000526872 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
ATXN3-214ENST00000526872 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
ATXN3-214ENST00000526872 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
ATXN3-214ENST00000526872 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
ATXN3-214ENST00000526872 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
ATXN3-214ENST00000526872 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
ATXN3-214ENST00000526872 NUBP1P53384 320 aa13.67□□□□□ -0.22
ATXN3-214ENST00000526872 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
ATXN3-214ENST00000526872 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
ATXN3-214ENST00000526872 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
ATXN3-214ENST00000526872 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
ATXN3-214ENST00000526872 PKD2Q13563 968 aa13.53□□□□□ -0.24
ATXN3-214ENST00000526872 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
ATXN3-214ENST00000526872 POTEHQ6S545 545 aa13.53□□□□□ -0.24
ATXN3-214ENST00000526872 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
ATXN3-214ENST00000526872 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
ATXN3-214ENST00000526872 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
ATXN3-214ENST00000526872 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
ATXN3-214ENST00000526872 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
ATXN3-214ENST00000526872 EVX2Q03828 476 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms