RNA–Protein interactions for RNA: ENST00000526548.3

PICALM-205, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best)

Gene PICALM, Length 738 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-205ENST00000526548 AEBP2Q6ZN18 517 aaPredicted RBP27.87■■■□□ 2.05
PICALM-205ENST00000526548 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
PICALM-205ENST00000526548 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
PICALM-205ENST00000526548 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
PICALM-205ENST00000526548 FOXD1Q16676 465 aa22.08■■□□□ 1.13
PICALM-205ENST00000526548 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
PICALM-205ENST00000526548 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
PICALM-205ENST00000526548 ADRA2BP18089 450 aa20.82■□□□□ 0.92
PICALM-205ENST00000526548 PIAS4Q8N2W9 510 aaPredicted RBP20.67■□□□□ 0.9
PICALM-205ENST00000526548 MSH5O43196 834 aa20.51■□□□□ 0.87
PICALM-205ENST00000526548 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
PICALM-205ENST00000526548 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
PICALM-205ENST00000526548 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
PICALM-205ENST00000526548 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
PICALM-205ENST00000526548 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
PICALM-205ENST00000526548 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
PICALM-205ENST00000526548 HOXD11P31277 338 aaPredicted RBP18.23■□□□□ 0.51
PICALM-205ENST00000526548 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
PICALM-205ENST00000526548 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
PICALM-205ENST00000526548 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
PICALM-205ENST00000526548 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
PICALM-205ENST00000526548 KCNA4P22459 653 aa17.82■□□□□ 0.44
PICALM-205ENST00000526548 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
PICALM-205ENST00000526548 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
PICALM-205ENST00000526548 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
PICALM-205ENST00000526548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
PICALM-205ENST00000526548 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
PICALM-205ENST00000526548 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
PICALM-205ENST00000526548 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
PICALM-205ENST00000526548 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
PICALM-205ENST00000526548 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
PICALM-205ENST00000526548 CAPN15O75808 1086 aa16.69■□□□□ 0.26
PICALM-205ENST00000526548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
PICALM-205ENST00000526548 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
PICALM-205ENST00000526548 DSG3P32926 999 aa16.54■□□□□ 0.24
PICALM-205ENST00000526548 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
PICALM-205ENST00000526548 APLP2Q06481 763 aa16.53■□□□□ 0.24
PICALM-205ENST00000526548 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
PICALM-205ENST00000526548 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
PICALM-205ENST00000526548 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
PICALM-205ENST00000526548 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
PICALM-205ENST00000526548 ZBTB22O15209 634 aa16.38■□□□□ 0.21
PICALM-205ENST00000526548 ABCB7O75027 752 aa16.34■□□□□ 0.21
PICALM-205ENST00000526548 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
PICALM-205ENST00000526548 POLA2Q14181 598 aa16.12■□□□□ 0.17
PICALM-205ENST00000526548 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
PICALM-205ENST00000526548 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
PICALM-205ENST00000526548 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
PICALM-205ENST00000526548 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
PICALM-205ENST00000526548 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
PICALM-205ENST00000526548 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
PICALM-205ENST00000526548 FBLN2P98095 1184 aa15.49■□□□□ 0.07
PICALM-205ENST00000526548 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
PICALM-205ENST00000526548 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
PICALM-205ENST00000526548 POTEHQ6S545 545 aa15.43■□□□□ 0.06
PICALM-205ENST00000526548 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
PICALM-205ENST00000526548 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
PICALM-205ENST00000526548 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
PICALM-205ENST00000526548 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
PICALM-205ENST00000526548 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
PICALM-205ENST00000526548 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
PICALM-205ENST00000526548 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
PICALM-205ENST00000526548 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
PICALM-205ENST00000526548 PIP4P2Q8N4L2 257 aa15.01□□□□□ -0.01
PICALM-205ENST00000526548 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
PICALM-205ENST00000526548 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
PICALM-205ENST00000526548 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
PICALM-205ENST00000526548 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
PICALM-205ENST00000526548 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
PICALM-205ENST00000526548 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
PICALM-205ENST00000526548 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
PICALM-205ENST00000526548 HAX1O00165 279 aa14.69□□□□□ -0.06
PICALM-205ENST00000526548 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
PICALM-205ENST00000526548 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
PICALM-205ENST00000526548 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.08
PICALM-205ENST00000526548 EVX2Q03828 476 aa14.57□□□□□ -0.08
PICALM-205ENST00000526548 PROM2Q8N271 834 aa14.49□□□□□ -0.09
PICALM-205ENST00000526548 C19orf67A6NJJ6 358 aa14.47□□□□□ -0.09
PICALM-205ENST00000526548 FARP1Q9Y4F1 1045 aaPredicted RBP14.46□□□□□ -0.09
PICALM-205ENST00000526548 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
PICALM-205ENST00000526548 FKBP8Q14318 412 aa14.36□□□□□ -0.11
PICALM-205ENST00000526548 CD44P16070 742 aaKnown RBP14.29□□□□□ -0.12
PICALM-205ENST00000526548 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
PICALM-205ENST00000526548 GABBR2O75899 941 aa14.22□□□□□ -0.13
PICALM-205ENST00000526548 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
PICALM-205ENST00000526548 MIER1Q8N108 512 aa14.15□□□□□ -0.14
PICALM-205ENST00000526548 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
PICALM-205ENST00000526548 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
PICALM-205ENST00000526548 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
PICALM-205ENST00000526548 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
PICALM-205ENST00000526548 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
PICALM-205ENST00000526548 CLCN6P51797 869 aa14.01□□□□□ -0.17
PICALM-205ENST00000526548 PHF12Q96QT6 1004 aa13.98□□□□□ -0.17
PICALM-205ENST00000526548 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
PICALM-205ENST00000526548 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
PICALM-205ENST00000526548 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
PICALM-205ENST00000526548 GALR2O43603 387 aaPredicted RBP13.92□□□□□ -0.18
PICALM-205ENST00000526548 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
PICALM-205ENST00000526548 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
PICALM-205ENST00000526548 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms