RNA–Protein interactions for RNA: ENST00000526324.5

RSF1-205, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RSF1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-205ENST00000526324 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
RSF1-205ENST00000526324 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
RSF1-205ENST00000526324 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
RSF1-205ENST00000526324 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
RSF1-205ENST00000526324 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
RSF1-205ENST00000526324 FOXD1Q16676 465 aa14.19□□□□□ -0.14
RSF1-205ENST00000526324 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
RSF1-205ENST00000526324 ADRA2BP18089 450 aa13.74□□□□□ -0.21
RSF1-205ENST00000526324 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
RSF1-205ENST00000526324 MSH5O43196 834 aa12.91□□□□□ -0.34
RSF1-205ENST00000526324 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
RSF1-205ENST00000526324 KCNA4P22459 653 aa12.56□□□□□ -0.4
RSF1-205ENST00000526324 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
RSF1-205ENST00000526324 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
RSF1-205ENST00000526324 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
RSF1-205ENST00000526324 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
RSF1-205ENST00000526324 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
RSF1-205ENST00000526324 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
RSF1-205ENST00000526324 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
RSF1-205ENST00000526324 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
RSF1-205ENST00000526324 POTEDQ86YR6 584 aa11.91□□□□□ -0.5
RSF1-205ENST00000526324 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
RSF1-205ENST00000526324 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
RSF1-205ENST00000526324 EHMT2Q96KQ7 1210 aa11.74□□□□□ -0.53
RSF1-205ENST00000526324 DCAF8L1A6NGE4 600 aa11.65□□□□□ -0.55
RSF1-205ENST00000526324 ZBTB22O15209 634 aa11.61□□□□□ -0.55
RSF1-205ENST00000526324 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
RSF1-205ENST00000526324 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
RSF1-205ENST00000526324 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
RSF1-205ENST00000526324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■■■□□ 16.1
RSF1-205ENST00000526324 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
RSF1-205ENST00000526324 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.61
RSF1-205ENST00000526324 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
RSF1-205ENST00000526324 ATF5Q9Y2D1 282 aaPredicted RBP11.06□□□□□ -0.64
RSF1-205ENST00000526324 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
RSF1-205ENST00000526324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
RSF1-205ENST00000526324 HNRNPUL2Q1KMD3 747 aaKnown RBP10.99□□□□□ -0.65
RSF1-205ENST00000526324 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
RSF1-205ENST00000526324 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
RSF1-205ENST00000526324 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
RSF1-205ENST00000526324 CAPN15O75808 1086 aa10.83□□□□□ -0.68
RSF1-205ENST00000526324 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
RSF1-205ENST00000526324 APLP2Q06481 763 aa10.79□□□□□ -0.68
RSF1-205ENST00000526324 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
RSF1-205ENST00000526324 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
RSF1-205ENST00000526324 ABCB7O75027 752 aa10.69□□□□□ -0.7
RSF1-205ENST00000526324 POLA2Q14181 598 aa10.67□□□□□ -0.7
RSF1-205ENST00000526324 DSG3P32926 999 aa10.66□□□□□ -0.7
RSF1-205ENST00000526324 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
RSF1-205ENST00000526324 FKBP8Q14318 412 aa10.41□□□□□ -0.74
RSF1-205ENST00000526324 FBLN2P98095 1184 aa10.39□□□□□ -0.75
RSF1-205ENST00000526324 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
RSF1-205ENST00000526324 OSCARQ8IYS5 282 aa10.33□□□□□ -0.76
RSF1-205ENST00000526324 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
RSF1-205ENST00000526324 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
RSF1-205ENST00000526324 SPDYE2BA6NHP3 402 aa10.15□□□□□ -0.78
RSF1-205ENST00000526324 SPDYE6P0CI01 402 aa10.15□□□□□ -0.78
RSF1-205ENST00000526324 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
RSF1-205ENST00000526324 PROM2Q8N271 834 aa10.14□□□□□ -0.79
RSF1-205ENST00000526324 SSUH2Q9Y2M2 353 aa10.14□□□□□ -0.79
RSF1-205ENST00000526324 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
RSF1-205ENST00000526324 RBM42Q9BTD8 480 aaKnown RBP10.03□□□□□ -0.8
RSF1-205ENST00000526324 AKT1S1Q96B36 256 aa9.97□□□□□ -0.81
RSF1-205ENST00000526324 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
RSF1-205ENST00000526324 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
RSF1-205ENST00000526324 VASPP50552 380 aaPredicted RBP9.85□□□□□ -0.83
RSF1-205ENST00000526324 PITPNM1O00562 1244 aa9.84□□□□□ -0.83
RSF1-205ENST00000526324 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
RSF1-205ENST00000526324 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
RSF1-205ENST00000526324 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
RSF1-205ENST00000526324 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
RSF1-205ENST00000526324 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
RSF1-205ENST00000526324 MIER1Q8N108 512 aa9.72□□□□□ -0.85
RSF1-205ENST00000526324 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
RSF1-205ENST00000526324 RTN4Q9NQC3 1192 aaKnown RBP9.68□□□□□ -0.86
RSF1-205ENST00000526324 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
RSF1-205ENST00000526324 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
RSF1-205ENST00000526324 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
RSF1-205ENST00000526324 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
RSF1-205ENST00000526324 KLHL34Q8N239 644 aa9.62□□□□□ -0.87
RSF1-205ENST00000526324 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.871e-7■■■■□ 24.4
RSF1-205ENST00000526324 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
RSF1-205ENST00000526324 PRKAR2AP13861 404 aaKnown RBP9.57□□□□□ -0.88
RSF1-205ENST00000526324 AMER1Q5JTC6 1135 aaPredicted RBP9.56□□□□□ -0.88
RSF1-205ENST00000526324 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
RSF1-205ENST00000526324 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
RSF1-205ENST00000526324 NUBP1P53384 320 aa9.51□□□□□ -0.89
RSF1-205ENST00000526324 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
RSF1-205ENST00000526324 PKD2Q13563 968 aa9.5□□□□□ -0.89
RSF1-205ENST00000526324 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
RSF1-205ENST00000526324 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
RSF1-205ENST00000526324 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
RSF1-205ENST00000526324 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
RSF1-205ENST00000526324 DCAF8Q5TAQ9 597 aa9.37□□□□□ -0.91
RSF1-205ENST00000526324 TSPYL2Q9H2G4 693 aaPredicted RBP9.37□□□□□ -0.91
RSF1-205ENST00000526324 FAM212AQ96EL1 285 aa9.35□□□□□ -0.91
RSF1-205ENST00000526324 ECM2O94769 699 aaPredicted RBP9.34□□□□□ -0.91
RSF1-205ENST00000526324 RGL2O15211 777 aa9.32□□□□□ -0.92
RSF1-205ENST00000526324 GSE1Q14687 1217 aa9.32□□□□□ -0.92
RSF1-205ENST00000526324 PYGBP11216 843 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms