RNA–Protein interactions for RNA: ENST00000526255.1

RCOR3-208, Transcript of REST corepressor 3, humanhuman

TSL 1 (best)

Gene RCOR3, Length 909 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-208ENST00000526255 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
RCOR3-208ENST00000526255 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
RCOR3-208ENST00000526255 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
RCOR3-208ENST00000526255 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
RCOR3-208ENST00000526255 FOXD1Q16676 465 aa18.55■□□□□ 0.56
RCOR3-208ENST00000526255 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
RCOR3-208ENST00000526255 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
RCOR3-208ENST00000526255 ADRA2BP18089 450 aa17.31■□□□□ 0.36
RCOR3-208ENST00000526255 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
RCOR3-208ENST00000526255 MSH5O43196 834 aa17.27■□□□□ 0.36
RCOR3-208ENST00000526255 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
RCOR3-208ENST00000526255 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
RCOR3-208ENST00000526255 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
RCOR3-208ENST00000526255 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
RCOR3-208ENST00000526255 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
RCOR3-208ENST00000526255 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
RCOR3-208ENST00000526255 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
RCOR3-208ENST00000526255 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
RCOR3-208ENST00000526255 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
RCOR3-208ENST00000526255 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
RCOR3-208ENST00000526255 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
RCOR3-208ENST00000526255 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
RCOR3-208ENST00000526255 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
RCOR3-208ENST00000526255 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
RCOR3-208ENST00000526255 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
RCOR3-208ENST00000526255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
RCOR3-208ENST00000526255 KCNA4P22459 653 aa14.39□□□□□ -0.11
RCOR3-208ENST00000526255 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
RCOR3-208ENST00000526255 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
RCOR3-208ENST00000526255 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
RCOR3-208ENST00000526255 CAPN15O75808 1086 aa13.94□□□□□ -0.18
RCOR3-208ENST00000526255 DSG3P32926 999 aa13.85□□□□□ -0.19
RCOR3-208ENST00000526255 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
RCOR3-208ENST00000526255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
RCOR3-208ENST00000526255 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
RCOR3-208ENST00000526255 ABCB7O75027 752 aa13.64□□□□□ -0.23
RCOR3-208ENST00000526255 APLP2Q06481 763 aa13.64□□□□□ -0.23
RCOR3-208ENST00000526255 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
RCOR3-208ENST00000526255 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
RCOR3-208ENST00000526255 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
RCOR3-208ENST00000526255 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
RCOR3-208ENST00000526255 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
RCOR3-208ENST00000526255 POLA2Q14181 598 aa13.36□□□□□ -0.27
RCOR3-208ENST00000526255 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
RCOR3-208ENST00000526255 POTEHQ6S545 545 aa13.27□□□□□ -0.29
RCOR3-208ENST00000526255 ZBTB22O15209 634 aa13.24□□□□□ -0.29
RCOR3-208ENST00000526255 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
RCOR3-208ENST00000526255 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
RCOR3-208ENST00000526255 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
RCOR3-208ENST00000526255 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
RCOR3-208ENST00000526255 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
RCOR3-208ENST00000526255 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
RCOR3-208ENST00000526255 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
RCOR3-208ENST00000526255 FBLN2P98095 1184 aa12.69□□□□□ -0.38
RCOR3-208ENST00000526255 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
RCOR3-208ENST00000526255 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
RCOR3-208ENST00000526255 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
RCOR3-208ENST00000526255 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
RCOR3-208ENST00000526255 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
RCOR3-208ENST00000526255 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
RCOR3-208ENST00000526255 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
RCOR3-208ENST00000526255 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
RCOR3-208ENST00000526255 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
RCOR3-208ENST00000526255 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
RCOR3-208ENST00000526255 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
RCOR3-208ENST00000526255 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
RCOR3-208ENST00000526255 HAX1O00165 279 aa12.42□□□□□ -0.42
RCOR3-208ENST00000526255 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
RCOR3-208ENST00000526255 SPDYE1Q8NFV5 336 aaPredicted RBP12.39□□□□□ -0.43
RCOR3-208ENST00000526255 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
RCOR3-208ENST00000526255 EVX2Q03828 476 aa12.32□□□□□ -0.44
RCOR3-208ENST00000526255 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
RCOR3-208ENST00000526255 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
RCOR3-208ENST00000526255 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
RCOR3-208ENST00000526255 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
RCOR3-208ENST00000526255 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
RCOR3-208ENST00000526255 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
RCOR3-208ENST00000526255 GABBR2O75899 941 aa11.99□□□□□ -0.49
RCOR3-208ENST00000526255 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
RCOR3-208ENST00000526255 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
RCOR3-208ENST00000526255 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
RCOR3-208ENST00000526255 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
RCOR3-208ENST00000526255 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
RCOR3-208ENST00000526255 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
RCOR3-208ENST00000526255 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
RCOR3-208ENST00000526255 PROM2Q8N271 834 aa11.69□□□□□ -0.54
RCOR3-208ENST00000526255 LHX8Q68G74 356 aa11.68□□□□□ -0.54
RCOR3-208ENST00000526255 CLCN6P51797 869 aa11.67□□□□□ -0.54
RCOR3-208ENST00000526255 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
RCOR3-208ENST00000526255 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
RCOR3-208ENST00000526255 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
RCOR3-208ENST00000526255 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
RCOR3-208ENST00000526255 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
RCOR3-208ENST00000526255 MIER1Q8N108 512 aa11.52□□□□□ -0.57
RCOR3-208ENST00000526255 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
RCOR3-208ENST00000526255 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
RCOR3-208ENST00000526255 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
RCOR3-208ENST00000526255 FKBP8Q14318 412 aa11.43□□□□□ -0.58
RCOR3-208ENST00000526255 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
RCOR3-208ENST00000526255 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms