RNA–Protein interactions for RNA: ENST00000525850.1

ATG13-205, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-205ENST00000525850 AEBP2Q6ZN18 517 aaPredicted RBP41.94■■■■■ 4.3
ATG13-205ENST00000525850 CHIC1Q5VXU3 224 aa41.13■■■■■ 4.17
ATG13-205ENST00000525850 PHF23Q9BUL5 403 aaPredicted RBP36.19■■■■□ 3.38
ATG13-205ENST00000525850 SENP3Q9H4L4 574 aaPredicted RBP35.58■■■■□ 3.29
ATG13-205ENST00000525850 PLPPR3Q6T4P5 718 aa33.48■■■□□ 2.95
ATG13-205ENST00000525850 FOXD1Q16676 465 aa32.98■■■□□ 2.87
ATG13-205ENST00000525850 PPP6R1Q9UPN7 881 aa31.86■■■□□ 2.69
ATG13-205ENST00000525850 ADRA2BP18089 450 aa31.85■■■□□ 2.69
ATG13-205ENST00000525850 PIAS4Q8N2W9 510 aaPredicted RBP31.16■■■□□ 2.58
ATG13-205ENST00000525850 MSH5O43196 834 aa30.36■■■□□ 2.45
ATG13-205ENST00000525850 PPP4R3CPQ6ZMV5 832 aa29.52■■■□□ 2.32
ATG13-205ENST00000525850 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.25
ATG13-205ENST00000525850 KCNA4P22459 653 aa29.03■■■□□ 2.24
ATG13-205ENST00000525850 MAPK8IP2Q13387 824 aaPredicted RBP28.83■■■□□ 2.21
ATG13-205ENST00000525850 NCBP3Q53F19 620 aaKnown RBP28.79■■■□□ 2.2
ATG13-205ENST00000525850 CNKSR2Q8WXI2 1034 aa28.65■■■□□ 2.18
ATG13-205ENST00000525850 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
ATG13-205ENST00000525850 NPM3O75607 178 aaKnown RBP28.38■■■□□ 2.13
ATG13-205ENST00000525850 RNF216Q9NWF9 866 aaPredicted RBP28.05■■■□□ 2.08
ATG13-205ENST00000525850 HOXD11P31277 338 aaPredicted RBP27.9■■■□□ 2.06
ATG13-205ENST00000525850 SLC4A1APQ9BWU0 796 aaKnown RBP27.68■■■□□ 2.02
ATG13-205ENST00000525850 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
ATG13-205ENST00000525850 POTEDQ86YR6 584 aa27.34■■□□□ 1.97
ATG13-205ENST00000525850 DCAF8L1A6NGE4 600 aa27.17■■□□□ 1.94
ATG13-205ENST00000525850 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
ATG13-205ENST00000525850 SLC4A2P04920 1241 aa26.75■■□□□ 1.87
ATG13-205ENST00000525850 ZBTB22O15209 634 aa26.73■■□□□ 1.87
ATG13-205ENST00000525850 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
ATG13-205ENST00000525850 FOXD4L1Q9NU39 408 aa26.67■■□□□ 1.86
ATG13-205ENST00000525850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.58■■□□□ 1.85
ATG13-205ENST00000525850 MYCNP04198 464 aaPredicted RBP26.23■■□□□ 1.79
ATG13-205ENST00000525850 U3KPZ7 1027 aaPredicted RBP26.19■■□□□ 1.78
ATG13-205ENST00000525850 RNF39Q9H2S5 420 aa26.04■■□□□ 1.76
ATG13-205ENST00000525850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.9■■□□□ 1.74
ATG13-205ENST00000525850 HNRNPUL2Q1KMD3 747 aaKnown RBP25.9■■□□□ 1.74
ATG13-205ENST00000525850 SAMD1Q6SPF0 538 aaPredicted RBP25.83■■□□□ 1.73
ATG13-205ENST00000525850 ATXN8OSP0DMR3 200 aa25.74■■□□□ 1.71
ATG13-205ENST00000525850 C1QBPQ07021 282 aaKnown RBP25.72■■□□□ 1.71
ATG13-205ENST00000525850 APLP2Q06481 763 aa25.6■■□□□ 1.69
ATG13-205ENST00000525850 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
ATG13-205ENST00000525850 SPINK5Q9NQ38 1064 aaPredicted RBP25.39■■□□□ 1.66
ATG13-205ENST00000525850 CAPN15O75808 1086 aa25.28■■□□□ 1.64
ATG13-205ENST00000525850 CACNB1Q02641 598 aaPredicted RBP25.21■■□□□ 1.63
ATG13-205ENST00000525850 ZNF219Q9P2Y4 722 aaPredicted RBP25.21■■□□□ 1.63
ATG13-205ENST00000525850 TRHP20396 242 aaPredicted RBP25.19■■□□□ 1.62
ATG13-205ENST00000525850 ABCB7O75027 752 aa24.83■■□□□ 1.57
ATG13-205ENST00000525850 POLA2Q14181 598 aa24.83■■□□□ 1.57
ATG13-205ENST00000525850 DSG3P32926 999 aa24.82■■□□□ 1.56
ATG13-205ENST00000525850 ZBTB12Q9Y330 459 aaPredicted RBP24.47■■□□□ 1.51
ATG13-205ENST00000525850 FBLN2P98095 1184 aa24.43■■□□□ 1.5
ATG13-205ENST00000525850 MKRN4PQ13434 485 aaPredicted RBP24.41■■□□□ 1.5
ATG13-205ENST00000525850 FKBP8Q14318 412 aa24.12■■□□□ 1.45
ATG13-205ENST00000525850 OSCARQ8IYS5 282 aa24■■□□□ 1.43
ATG13-205ENST00000525850 SPDYE4A6NLX3 237 aa23.94■■□□□ 1.42
ATG13-205ENST00000525850 SPDYE2BA6NHP3 402 aa23.81■■□□□ 1.4
ATG13-205ENST00000525850 SPDYE6P0CI01 402 aa23.81■■□□□ 1.4
ATG13-205ENST00000525850 SPDYE2Q495Y8 402 aa23.81■■□□□ 1.4
ATG13-205ENST00000525850 ZNF692Q9BU19 519 aaPredicted RBP23.72■■□□□ 1.39
ATG13-205ENST00000525850 RBM42Q9BTD8 480 aaKnown RBP23.66■■□□□ 1.38
ATG13-205ENST00000525850 SSUH2Q9Y2M2 353 aa23.65■■□□□ 1.38
ATG13-205ENST00000525850 PROM2Q8N271 834 aa23.6■■□□□ 1.37
ATG13-205ENST00000525850 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
ATG13-205ENST00000525850 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
ATG13-205ENST00000525850 FBXO3Q9UK99 471 aa23.22■■□□□ 1.31
ATG13-205ENST00000525850 REM2Q8IYK8 340 aaPredicted RBP23.17■■□□□ 1.3
ATG13-205ENST00000525850 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
ATG13-205ENST00000525850 SPDYE1Q8NFV5 336 aaPredicted RBP23.06■■□□□ 1.28
ATG13-205ENST00000525850 PITPNM1O00562 1244 aa22.92■■□□□ 1.26
ATG13-205ENST00000525850 VASPP50552 380 aaPredicted RBP22.92■■□□□ 1.26
ATG13-205ENST00000525850 CLEC11AQ9Y240 323 aa22.92■■□□□ 1.26
ATG13-205ENST00000525850 PRR29P0C7W0 189 aa22.74■■□□□ 1.23
ATG13-205ENST00000525850 MIER1Q8N108 512 aa22.67■■□□□ 1.22
ATG13-205ENST00000525850 PLCD3Q8N3E9 789 aa22.67■■□□□ 1.22
ATG13-205ENST00000525850 CHRDL2Q6WN34 429 aa22.61■■□□□ 1.21
ATG13-205ENST00000525850 IFNLR1Q8IU57 520 aaPredicted RBP22.6■■□□□ 1.21
ATG13-205ENST00000525850 PLEKHG5O94827 1062 aa22.54■■□□□ 1.2
ATG13-205ENST00000525850 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
ATG13-205ENST00000525850 KLHL34Q8N239 644 aa22.45■■□□□ 1.18
ATG13-205ENST00000525850 FXR2P51116 673 aaKnown RBP eCLIP22.44■■□□□ 1.18
ATG13-205ENST00000525850 ZBTB47Q9UFB7 747 aaPredicted RBP22.41■■□□□ 1.18
ATG13-205ENST00000525850 CHADLQ6NUI6 762 aa22.36■■□□□ 1.17
ATG13-205ENST00000525850 PIP4P2Q8N4L2 257 aa22.36■■□□□ 1.17
ATG13-205ENST00000525850 PRKAR2AP13861 404 aaKnown RBP22.33■■□□□ 1.17
ATG13-205ENST00000525850 MNX1P50219 401 aaPredicted RBP22.31■■□□□ 1.16
ATG13-205ENST00000525850 SPOCK2Q92563 424 aa22.31■■□□□ 1.16
ATG13-205ENST00000525850 AMER1Q5JTC6 1135 aaPredicted RBP22.29■■□□□ 1.16
ATG13-205ENST00000525850 RTN4Q9NQC3 1192 aaKnown RBP22.22■■□□□ 1.15
ATG13-205ENST00000525850 FARP1Q9Y4F1 1045 aaPredicted RBP22.18■■□□□ 1.14
ATG13-205ENST00000525850 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
ATG13-205ENST00000525850 NUBP1P53384 320 aa22.09■■□□□ 1.13
ATG13-205ENST00000525850 RASEFQ8IZ41 740 aa21.96■■□□□ 1.11
ATG13-205ENST00000525850 FAM212AQ96EL1 285 aa21.92■■□□□ 1.1
ATG13-205ENST00000525850 CIZ1Q9ULV3 898 aaPredicted RBP21.92■■□□□ 1.1
ATG13-205ENST00000525850 PKD2Q13563 968 aa21.91■■□□□ 1.1
ATG13-205ENST00000525850 GSE1Q14687 1217 aa21.89■■□□□ 1.09
ATG13-205ENST00000525850 DCAF8Q5TAQ9 597 aa21.86■■□□□ 1.09
ATG13-205ENST00000525850 TSPYL2Q9H2G4 693 aaPredicted RBP21.78■■□□□ 1.08
ATG13-205ENST00000525850 ECM2O94769 699 aaPredicted RBP21.74■■□□□ 1.07
ATG13-205ENST00000525850 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
ATG13-205ENST00000525850 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms