RNA–Protein interactions for RNA: ENST00000525558.1

ARHGAP42-204, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 4

Gene ARHGAP42, Length 439 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-204ENST00000525558 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
ARHGAP42-204ENST00000525558 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
ARHGAP42-204ENST00000525558 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
ARHGAP42-204ENST00000525558 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
ARHGAP42-204ENST00000525558 FOXD1Q16676 465 aa21.56■■□□□ 1.04
ARHGAP42-204ENST00000525558 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
ARHGAP42-204ENST00000525558 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
ARHGAP42-204ENST00000525558 ADRA2BP18089 450 aa20.5■□□□□ 0.87
ARHGAP42-204ENST00000525558 PIAS4Q8N2W9 510 aaPredicted RBP20.19■□□□□ 0.82
ARHGAP42-204ENST00000525558 MSH5O43196 834 aa19.89■□□□□ 0.77
ARHGAP42-204ENST00000525558 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
ARHGAP42-204ENST00000525558 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
ARHGAP42-204ENST00000525558 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
ARHGAP42-204ENST00000525558 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
ARHGAP42-204ENST00000525558 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
ARHGAP42-204ENST00000525558 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
ARHGAP42-204ENST00000525558 KCNA4P22459 653 aa18.06■□□□□ 0.48
ARHGAP42-204ENST00000525558 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
ARHGAP42-204ENST00000525558 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
ARHGAP42-204ENST00000525558 RNF216Q9NWF9 866 aaPredicted RBP17.97■□□□□ 0.47
ARHGAP42-204ENST00000525558 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
ARHGAP42-204ENST00000525558 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
ARHGAP42-204ENST00000525558 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
ARHGAP42-204ENST00000525558 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
ARHGAP42-204ENST00000525558 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
ARHGAP42-204ENST00000525558 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
ARHGAP42-204ENST00000525558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
ARHGAP42-204ENST00000525558 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
ARHGAP42-204ENST00000525558 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
ARHGAP42-204ENST00000525558 ZBTB22O15209 634 aa16.7■□□□□ 0.26
ARHGAP42-204ENST00000525558 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
ARHGAP42-204ENST00000525558 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
ARHGAP42-204ENST00000525558 MYCNP04198 464 aaPredicted RBP16.52■□□□□ 0.24
ARHGAP42-204ENST00000525558 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
ARHGAP42-204ENST00000525558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
ARHGAP42-204ENST00000525558 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
ARHGAP42-204ENST00000525558 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
ARHGAP42-204ENST00000525558 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
ARHGAP42-204ENST00000525558 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
ARHGAP42-204ENST00000525558 CAPN15O75808 1086 aa16.26■□□□□ 0.19
ARHGAP42-204ENST00000525558 APLP2Q06481 763 aa16.24■□□□□ 0.19
ARHGAP42-204ENST00000525558 ATF5Q9Y2D1 282 aaPredicted RBP16.2■□□□□ 0.18
ARHGAP42-204ENST00000525558 DSG3P32926 999 aa16.18■□□□□ 0.18
ARHGAP42-204ENST00000525558 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
ARHGAP42-204ENST00000525558 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
ARHGAP42-204ENST00000525558 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
ARHGAP42-204ENST00000525558 ABCB7O75027 752 aa15.98■□□□□ 0.15
ARHGAP42-204ENST00000525558 POLA2Q14181 598 aa15.87■□□□□ 0.13
ARHGAP42-204ENST00000525558 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
ARHGAP42-204ENST00000525558 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
ARHGAP42-204ENST00000525558 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
ARHGAP42-204ENST00000525558 FBLN2P98095 1184 aa15.35■□□□□ 0.05
ARHGAP42-204ENST00000525558 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
ARHGAP42-204ENST00000525558 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
ARHGAP42-204ENST00000525558 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
ARHGAP42-204ENST00000525558 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
ARHGAP42-204ENST00000525558 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
ARHGAP42-204ENST00000525558 SSUH2Q9Y2M2 353 aa15.09■□□□□ 0.01
ARHGAP42-204ENST00000525558 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
ARHGAP42-204ENST00000525558 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
ARHGAP42-204ENST00000525558 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
ARHGAP42-204ENST00000525558 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
ARHGAP42-204ENST00000525558 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
ARHGAP42-204ENST00000525558 PABPN1Q86U42 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
ARHGAP42-204ENST00000525558 PROM2Q8N271 834 aa14.78□□□□□ -0.04
ARHGAP42-204ENST00000525558 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
ARHGAP42-204ENST00000525558 FKBP8Q14318 412 aa14.67□□□□□ -0.06
ARHGAP42-204ENST00000525558 POTEHQ6S545 545 aa14.65□□□□□ -0.06
ARHGAP42-204ENST00000525558 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
ARHGAP42-204ENST00000525558 PIP4P2Q8N4L2 257 aa14.62□□□□□ -0.07
ARHGAP42-204ENST00000525558 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
ARHGAP42-204ENST00000525558 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
ARHGAP42-204ENST00000525558 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
ARHGAP42-204ENST00000525558 PRKAR2AP13861 404 aaKnown RBP14.41□□□□□ -0.1
ARHGAP42-204ENST00000525558 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
ARHGAP42-204ENST00000525558 CREBZFQ9NS37 354 aa14.36□□□□□ -0.11
ARHGAP42-204ENST00000525558 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
ARHGAP42-204ENST00000525558 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
ARHGAP42-204ENST00000525558 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
ARHGAP42-204ENST00000525558 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
ARHGAP42-204ENST00000525558 EVX2Q03828 476 aa14.14□□□□□ -0.15
ARHGAP42-204ENST00000525558 HAX1O00165 279 aa14.1□□□□□ -0.15
ARHGAP42-204ENST00000525558 MIER1Q8N108 512 aa14.09□□□□□ -0.15
ARHGAP42-204ENST00000525558 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
ARHGAP42-204ENST00000525558 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
ARHGAP42-204ENST00000525558 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
ARHGAP42-204ENST00000525558 SP7Q8TDD2 431 aaPredicted RBP13.97□□□□□ -0.17
ARHGAP42-204ENST00000525558 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
ARHGAP42-204ENST00000525558 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
ARHGAP42-204ENST00000525558 NUBP1P53384 320 aa13.9□□□□□ -0.18
ARHGAP42-204ENST00000525558 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
ARHGAP42-204ENST00000525558 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
ARHGAP42-204ENST00000525558 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
ARHGAP42-204ENST00000525558 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
ARHGAP42-204ENST00000525558 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
ARHGAP42-204ENST00000525558 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
ARHGAP42-204ENST00000525558 GABBR2O75899 941 aa13.77□□□□□ -0.21
ARHGAP42-204ENST00000525558 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
ARHGAP42-204ENST00000525558 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
ARHGAP42-204ENST00000525558 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms