RNA–Protein interactions for RNA: ENST00000525549.5

MS4A6A-204, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 552 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-204ENST00000525549 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
MS4A6A-204ENST00000525549 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
MS4A6A-204ENST00000525549 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
MS4A6A-204ENST00000525549 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
MS4A6A-204ENST00000525549 FOXD1Q16676 465 aa19.21■□□□□ 0.67
MS4A6A-204ENST00000525549 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
MS4A6A-204ENST00000525549 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
MS4A6A-204ENST00000525549 ADRA2BP18089 450 aa18.22■□□□□ 0.51
MS4A6A-204ENST00000525549 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
MS4A6A-204ENST00000525549 MSH5O43196 834 aa17.85■□□□□ 0.45
MS4A6A-204ENST00000525549 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
MS4A6A-204ENST00000525549 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
MS4A6A-204ENST00000525549 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
MS4A6A-204ENST00000525549 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
MS4A6A-204ENST00000525549 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
MS4A6A-204ENST00000525549 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
MS4A6A-204ENST00000525549 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
MS4A6A-204ENST00000525549 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
MS4A6A-204ENST00000525549 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
MS4A6A-204ENST00000525549 KCNA4P22459 653 aa15.91■□□□□ 0.14
MS4A6A-204ENST00000525549 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
MS4A6A-204ENST00000525549 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
MS4A6A-204ENST00000525549 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
MS4A6A-204ENST00000525549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
MS4A6A-204ENST00000525549 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
MS4A6A-204ENST00000525549 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
MS4A6A-204ENST00000525549 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
MS4A6A-204ENST00000525549 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
MS4A6A-204ENST00000525549 SLC4A2P04920 1241 aa15.05■□□□□ -0
MS4A6A-204ENST00000525549 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
MS4A6A-204ENST00000525549 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
MS4A6A-204ENST00000525549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
MS4A6A-204ENST00000525549 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
MS4A6A-204ENST00000525549 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
MS4A6A-204ENST00000525549 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
MS4A6A-204ENST00000525549 APLP2Q06481 763 aa14.63□□□□□ -0.07
MS4A6A-204ENST00000525549 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
MS4A6A-204ENST00000525549 ZBTB22O15209 634 aa14.62□□□□□ -0.07
MS4A6A-204ENST00000525549 CAPN15O75808 1086 aa14.6□□□□□ -0.07
MS4A6A-204ENST00000525549 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
MS4A6A-204ENST00000525549 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
MS4A6A-204ENST00000525549 DSG3P32926 999 aa14.42□□□□□ -0.1
MS4A6A-204ENST00000525549 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
MS4A6A-204ENST00000525549 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
MS4A6A-204ENST00000525549 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
MS4A6A-204ENST00000525549 ABCB7O75027 752 aa14.28□□□□□ -0.12
MS4A6A-204ENST00000525549 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
MS4A6A-204ENST00000525549 POLA2Q14181 598 aa14.16□□□□□ -0.14
MS4A6A-204ENST00000525549 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
MS4A6A-204ENST00000525549 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
MS4A6A-204ENST00000525549 FBLN2P98095 1184 aa13.74□□□□□ -0.21
MS4A6A-204ENST00000525549 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
MS4A6A-204ENST00000525549 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
MS4A6A-204ENST00000525549 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
MS4A6A-204ENST00000525549 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
MS4A6A-204ENST00000525549 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
MS4A6A-204ENST00000525549 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
MS4A6A-204ENST00000525549 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
MS4A6A-204ENST00000525549 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
MS4A6A-204ENST00000525549 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
MS4A6A-204ENST00000525549 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
MS4A6A-204ENST00000525549 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
MS4A6A-204ENST00000525549 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
MS4A6A-204ENST00000525549 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
MS4A6A-204ENST00000525549 POTEHQ6S545 545 aa13.21□□□□□ -0.29
MS4A6A-204ENST00000525549 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
MS4A6A-204ENST00000525549 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
MS4A6A-204ENST00000525549 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
MS4A6A-204ENST00000525549 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
MS4A6A-204ENST00000525549 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
MS4A6A-204ENST00000525549 FKBP8Q14318 412 aa12.97□□□□□ -0.33
MS4A6A-204ENST00000525549 PROM2Q8N271 834 aa12.96□□□□□ -0.33
MS4A6A-204ENST00000525549 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
MS4A6A-204ENST00000525549 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
MS4A6A-204ENST00000525549 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
MS4A6A-204ENST00000525549 HAX1O00165 279 aa12.73□□□□□ -0.37
MS4A6A-204ENST00000525549 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
MS4A6A-204ENST00000525549 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-204ENST00000525549 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
MS4A6A-204ENST00000525549 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
MS4A6A-204ENST00000525549 MIER1Q8N108 512 aa12.59□□□□□ -0.39
MS4A6A-204ENST00000525549 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
MS4A6A-204ENST00000525549 EVX2Q03828 476 aa12.57□□□□□ -0.4
MS4A6A-204ENST00000525549 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
MS4A6A-204ENST00000525549 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
MS4A6A-204ENST00000525549 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
MS4A6A-204ENST00000525549 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
MS4A6A-204ENST00000525549 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
MS4A6A-204ENST00000525549 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
MS4A6A-204ENST00000525549 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
MS4A6A-204ENST00000525549 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
MS4A6A-204ENST00000525549 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
MS4A6A-204ENST00000525549 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
MS4A6A-204ENST00000525549 GABBR2O75899 941 aa12.33□□□□□ -0.44
MS4A6A-204ENST00000525549 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
MS4A6A-204ENST00000525549 CLCN6P51797 869 aa12.3□□□□□ -0.44
MS4A6A-204ENST00000525549 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
MS4A6A-204ENST00000525549 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
MS4A6A-204ENST00000525549 NUBP1P53384 320 aa12.28□□□□□ -0.44
MS4A6A-204ENST00000525549 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms