RNA–Protein interactions for RNA: ENST00000525178.5

ATM-207, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 880 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-207ENST00000525178 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
ATM-207ENST00000525178 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
ATM-207ENST00000525178 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
ATM-207ENST00000525178 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
ATM-207ENST00000525178 FOXD1Q16676 465 aa14.82□□□□□ -0.04
ATM-207ENST00000525178 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
ATM-207ENST00000525178 MSH5O43196 834 aa13.89□□□□□ -0.19
ATM-207ENST00000525178 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
ATM-207ENST00000525178 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
ATM-207ENST00000525178 ADRA2BP18089 450 aa13.83□□□□□ -0.2
ATM-207ENST00000525178 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
ATM-207ENST00000525178 KCNA4P22459 653 aa13□□□□□ -0.33
ATM-207ENST00000525178 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
ATM-207ENST00000525178 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
ATM-207ENST00000525178 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
ATM-207ENST00000525178 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
ATM-207ENST00000525178 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
ATM-207ENST00000525178 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
ATM-207ENST00000525178 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
ATM-207ENST00000525178 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
ATM-207ENST00000525178 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
ATM-207ENST00000525178 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
ATM-207ENST00000525178 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
ATM-207ENST00000525178 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
ATM-207ENST00000525178 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
ATM-207ENST00000525178 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
ATM-207ENST00000525178 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
ATM-207ENST00000525178 ZBTB22O15209 634 aa11.96□□□□□ -0.49
ATM-207ENST00000525178 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
ATM-207ENST00000525178 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
ATM-207ENST00000525178 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
ATM-207ENST00000525178 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
ATM-207ENST00000525178 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
ATM-207ENST00000525178 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
ATM-207ENST00000525178 C1QBPQ07021 282 aaKnown RBP11.67□□□□□ -0.54
ATM-207ENST00000525178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.6□□□□□ -0.55
ATM-207ENST00000525178 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
ATM-207ENST00000525178 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
ATM-207ENST00000525178 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
ATM-207ENST00000525178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
ATM-207ENST00000525178 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
ATM-207ENST00000525178 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
ATM-207ENST00000525178 CAPN15O75808 1086 aa11.18□□□□□ -0.62
ATM-207ENST00000525178 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
ATM-207ENST00000525178 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
ATM-207ENST00000525178 DSG3P32926 999 aa11.09□□□□□ -0.63
ATM-207ENST00000525178 APLP2Q06481 763 aa11.07□□□□□ -0.64
ATM-207ENST00000525178 FKBP8Q14318 412 aa11.02□□□□□ -0.65
ATM-207ENST00000525178 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
ATM-207ENST00000525178 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
ATM-207ENST00000525178 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
ATM-207ENST00000525178 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
ATM-207ENST00000525178 ABCB7O75027 752 aa10.92□□□□□ -0.66
ATM-207ENST00000525178 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.66
ATM-207ENST00000525178 BCANQ96GW7 911 aa10.89□□□□□ -0.67
ATM-207ENST00000525178 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
ATM-207ENST00000525178 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
ATM-207ENST00000525178 POLA2Q14181 598 aa10.72□□□□□ -0.69
ATM-207ENST00000525178 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
ATM-207ENST00000525178 FBLN2P98095 1184 aa10.7□□□□□ -0.7
ATM-207ENST00000525178 HAP1P54257 671 aaPredicted RBP10.69□□□□□ -0.7
ATM-207ENST00000525178 ARXQ96QS3 562 aa10.69□□□□□ -0.7
ATM-207ENST00000525178 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
ATM-207ENST00000525178 TPRNQ4KMQ1 711 aa10.62□□□□□ -0.71
ATM-207ENST00000525178 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
ATM-207ENST00000525178 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
ATM-207ENST00000525178 POTEHQ6S545 545 aa10.59□□□□□ -0.71
ATM-207ENST00000525178 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
ATM-207ENST00000525178 TIMELESSQ9UNS1 1208 aa10.55□□□□□ -0.72
ATM-207ENST00000525178 PROM2Q8N271 834 aa10.52□□□□□ -0.73
ATM-207ENST00000525178 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
ATM-207ENST00000525178 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
ATM-207ENST00000525178 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
ATM-207ENST00000525178 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
ATM-207ENST00000525178 OSCARQ8IYS5 282 aa10.38□□□□□ -0.75
ATM-207ENST00000525178 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
ATM-207ENST00000525178 CHRDL2Q6WN34 429 aa10.35□□□□□ -0.75
ATM-207ENST00000525178 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
ATM-207ENST00000525178 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
ATM-207ENST00000525178 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
ATM-207ENST00000525178 SPDYE2BA6NHP3 402 aa10.33□□□□□ -0.76
ATM-207ENST00000525178 SPDYE6P0CI01 402 aa10.33□□□□□ -0.76
ATM-207ENST00000525178 SPDYE2Q495Y8 402 aa10.33□□□□□ -0.76
ATM-207ENST00000525178 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
ATM-207ENST00000525178 SSUH2Q9Y2M2 353 aa10.29□□□□□ -0.76
ATM-207ENST00000525178 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
ATM-207ENST00000525178 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
ATM-207ENST00000525178 KDM2AQ9Y2K7 1162 aa10.24□□□□□ -0.77
ATM-207ENST00000525178 PABPN1Q86U42 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
ATM-207ENST00000525178 RANGAP1P46060 587 aaPredicted RBP10.2□□□□□ -0.78
ATM-207ENST00000525178 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
ATM-207ENST00000525178 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.16□□□□□ -0.78
ATM-207ENST00000525178 PITPNM1O00562 1244 aa10.15□□□□□ -0.78
ATM-207ENST00000525178 ABCC9O60706 1549 aa10.15□□□□□ -0.78
ATM-207ENST00000525178 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
ATM-207ENST00000525178 KLHL34Q8N239 644 aa10.11□□□□□ -0.79
ATM-207ENST00000525178 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
ATM-207ENST00000525178 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
ATM-207ENST00000525178 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
ATM-207ENST00000525178 C14orf37Q86TY3 774 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms