RNA–Protein interactions for RNA: ENST00000524884.1

BBS1-206, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 4

Gene BBS1, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-206ENST00000524884 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
BBS1-206ENST00000524884 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
BBS1-206ENST00000524884 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
BBS1-206ENST00000524884 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
BBS1-206ENST00000524884 FOXD1Q16676 465 aa18.69■□□□□ 0.58
BBS1-206ENST00000524884 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
BBS1-206ENST00000524884 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
BBS1-206ENST00000524884 ADRA2BP18089 450 aa17.81■□□□□ 0.44
BBS1-206ENST00000524884 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
BBS1-206ENST00000524884 MSH5O43196 834 aa17.31■□□□□ 0.36
BBS1-206ENST00000524884 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
BBS1-206ENST00000524884 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
BBS1-206ENST00000524884 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
BBS1-206ENST00000524884 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
BBS1-206ENST00000524884 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
BBS1-206ENST00000524884 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
BBS1-206ENST00000524884 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
BBS1-206ENST00000524884 KCNA4P22459 653 aa15.65■□□□□ 0.1
BBS1-206ENST00000524884 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
BBS1-206ENST00000524884 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
BBS1-206ENST00000524884 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
BBS1-206ENST00000524884 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
BBS1-206ENST00000524884 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
BBS1-206ENST00000524884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
BBS1-206ENST00000524884 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
BBS1-206ENST00000524884 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
BBS1-206ENST00000524884 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
BBS1-206ENST00000524884 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
BBS1-206ENST00000524884 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
BBS1-206ENST00000524884 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
BBS1-206ENST00000524884 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
BBS1-206ENST00000524884 ZBTB22O15209 634 aa14.39□□□□□ -0.11
BBS1-206ENST00000524884 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
BBS1-206ENST00000524884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
BBS1-206ENST00000524884 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
BBS1-206ENST00000524884 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
BBS1-206ENST00000524884 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
BBS1-206ENST00000524884 CAPN15O75808 1086 aa14.23□□□□□ -0.13
BBS1-206ENST00000524884 APLP2Q06481 763 aa14.23□□□□□ -0.13
BBS1-206ENST00000524884 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
BBS1-206ENST00000524884 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
BBS1-206ENST00000524884 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
BBS1-206ENST00000524884 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
BBS1-206ENST00000524884 DSG3P32926 999 aa14.03□□□□□ -0.16
BBS1-206ENST00000524884 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
BBS1-206ENST00000524884 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
BBS1-206ENST00000524884 ABCB7O75027 752 aa13.94□□□□□ -0.18
BBS1-206ENST00000524884 POLA2Q14181 598 aa13.84□□□□□ -0.19
BBS1-206ENST00000524884 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
BBS1-206ENST00000524884 FBLN2P98095 1184 aa13.43□□□□□ -0.26
BBS1-206ENST00000524884 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
BBS1-206ENST00000524884 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
BBS1-206ENST00000524884 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
BBS1-206ENST00000524884 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
BBS1-206ENST00000524884 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
BBS1-206ENST00000524884 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
BBS1-206ENST00000524884 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
BBS1-206ENST00000524884 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
BBS1-206ENST00000524884 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
BBS1-206ENST00000524884 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
BBS1-206ENST00000524884 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
BBS1-206ENST00000524884 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
BBS1-206ENST00000524884 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
BBS1-206ENST00000524884 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
BBS1-206ENST00000524884 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
BBS1-206ENST00000524884 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
BBS1-206ENST00000524884 FKBP8Q14318 412 aa12.8□□□□□ -0.36
BBS1-206ENST00000524884 POTEHQ6S545 545 aa12.76□□□□□ -0.37
BBS1-206ENST00000524884 PROM2Q8N271 834 aa12.71□□□□□ -0.37
BBS1-206ENST00000524884 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
BBS1-206ENST00000524884 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
BBS1-206ENST00000524884 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
BBS1-206ENST00000524884 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
BBS1-206ENST00000524884 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
BBS1-206ENST00000524884 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
BBS1-206ENST00000524884 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
BBS1-206ENST00000524884 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
BBS1-206ENST00000524884 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
BBS1-206ENST00000524884 HAX1O00165 279 aa12.37□□□□□ -0.43
BBS1-206ENST00000524884 MIER1Q8N108 512 aa12.36□□□□□ -0.43
BBS1-206ENST00000524884 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
BBS1-206ENST00000524884 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
BBS1-206ENST00000524884 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
BBS1-206ENST00000524884 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
BBS1-206ENST00000524884 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
BBS1-206ENST00000524884 EVX2Q03828 476 aa12.24□□□□□ -0.45
BBS1-206ENST00000524884 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
BBS1-206ENST00000524884 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
BBS1-206ENST00000524884 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
BBS1-206ENST00000524884 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
BBS1-206ENST00000524884 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
BBS1-206ENST00000524884 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
BBS1-206ENST00000524884 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
BBS1-206ENST00000524884 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
BBS1-206ENST00000524884 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
BBS1-206ENST00000524884 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
BBS1-206ENST00000524884 NUBP1P53384 320 aa12.04□□□□□ -0.48
BBS1-206ENST00000524884 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
BBS1-206ENST00000524884 GABBR2O75899 941 aa11.98□□□□□ -0.49
BBS1-206ENST00000524884 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms