RNA–Protein interactions for RNA: ENST00000524691.1

CCDC190-204, Transcript of coiled-coil domain containing 190, humanhuman

TSL 1 (best)

Gene CCDC190, Length 876 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190-204ENST00000524691 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
CCDC190-204ENST00000524691 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
CCDC190-204ENST00000524691 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
CCDC190-204ENST00000524691 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
CCDC190-204ENST00000524691 FOXD1Q16676 465 aa21.72■■□□□ 1.07
CCDC190-204ENST00000524691 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
CCDC190-204ENST00000524691 MSH5O43196 834 aa20.39■□□□□ 0.85
CCDC190-204ENST00000524691 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
CCDC190-204ENST00000524691 ADRA2BP18089 450 aa20.27■□□□□ 0.84
CCDC190-204ENST00000524691 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
CCDC190-204ENST00000524691 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
CCDC190-204ENST00000524691 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
CCDC190-204ENST00000524691 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CCDC190-204ENST00000524691 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
CCDC190-204ENST00000524691 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
CCDC190-204ENST00000524691 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
CCDC190-204ENST00000524691 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
CCDC190-204ENST00000524691 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
CCDC190-204ENST00000524691 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
CCDC190-204ENST00000524691 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
CCDC190-204ENST00000524691 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
CCDC190-204ENST00000524691 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
CCDC190-204ENST00000524691 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
CCDC190-204ENST00000524691 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
CCDC190-204ENST00000524691 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
CCDC190-204ENST00000524691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC190-204ENST00000524691 KCNA4P22459 653 aa16.9■□□□□ 0.3
CCDC190-204ENST00000524691 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
CCDC190-204ENST00000524691 CAPN15O75808 1086 aa16.45■□□□□ 0.22
CCDC190-204ENST00000524691 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
CCDC190-204ENST00000524691 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
CCDC190-204ENST00000524691 DSG3P32926 999 aa16.26■□□□□ 0.19
CCDC190-204ENST00000524691 APLP2Q06481 763 aa16.25■□□□□ 0.19
CCDC190-204ENST00000524691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
CCDC190-204ENST00000524691 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
CCDC190-204ENST00000524691 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
CCDC190-204ENST00000524691 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
CCDC190-204ENST00000524691 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
CCDC190-204ENST00000524691 ABCB7O75027 752 aa16.06■□□□□ 0.16
CCDC190-204ENST00000524691 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
CCDC190-204ENST00000524691 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
CCDC190-204ENST00000524691 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
CCDC190-204ENST00000524691 POLA2Q14181 598 aa15.7■□□□□ 0.1
CCDC190-204ENST00000524691 POTEHQ6S545 545 aa15.61■□□□□ 0.09
CCDC190-204ENST00000524691 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
CCDC190-204ENST00000524691 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
CCDC190-204ENST00000524691 ZBTB22O15209 634 aa15.49■□□□□ 0.07
CCDC190-204ENST00000524691 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
CCDC190-204ENST00000524691 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
CCDC190-204ENST00000524691 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
CCDC190-204ENST00000524691 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
CCDC190-204ENST00000524691 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
CCDC190-204ENST00000524691 FBLN2P98095 1184 aa15.05■□□□□ -0
CCDC190-204ENST00000524691 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
CCDC190-204ENST00000524691 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
CCDC190-204ENST00000524691 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
CCDC190-204ENST00000524691 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
CCDC190-204ENST00000524691 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
CCDC190-204ENST00000524691 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
CCDC190-204ENST00000524691 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
CCDC190-204ENST00000524691 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
CCDC190-204ENST00000524691 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
CCDC190-204ENST00000524691 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
CCDC190-204ENST00000524691 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCDC190-204ENST00000524691 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
CCDC190-204ENST00000524691 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
CCDC190-204ENST00000524691 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
CCDC190-204ENST00000524691 HAX1O00165 279 aa14.63□□□□□ -0.07
CCDC190-204ENST00000524691 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
CCDC190-204ENST00000524691 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
CCDC190-204ENST00000524691 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC190-204ENST00000524691 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
CCDC190-204ENST00000524691 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
CCDC190-204ENST00000524691 EVX2Q03828 476 aa14.33□□□□□ -0.12
CCDC190-204ENST00000524691 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
CCDC190-204ENST00000524691 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
CCDC190-204ENST00000524691 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
CCDC190-204ENST00000524691 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
CCDC190-204ENST00000524691 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
CCDC190-204ENST00000524691 GABBR2O75899 941 aa14.06□□□□□ -0.16
CCDC190-204ENST00000524691 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
CCDC190-204ENST00000524691 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
CCDC190-204ENST00000524691 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
CCDC190-204ENST00000524691 CLCN6P51797 869 aa13.83□□□□□ -0.2
CCDC190-204ENST00000524691 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC190-204ENST00000524691 ZNF579Q8NAF0 562 aaKnown RBP13.81□□□□□ -0.2
CCDC190-204ENST00000524691 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
CCDC190-204ENST00000524691 LHX8Q68G74 356 aa13.73□□□□□ -0.21
CCDC190-204ENST00000524691 PROM2Q8N271 834 aa13.72□□□□□ -0.21
CCDC190-204ENST00000524691 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
CCDC190-204ENST00000524691 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
CCDC190-204ENST00000524691 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
CCDC190-204ENST00000524691 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
CCDC190-204ENST00000524691 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
CCDC190-204ENST00000524691 MIER1Q8N108 512 aa13.58□□□□□ -0.24
CCDC190-204ENST00000524691 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
CCDC190-204ENST00000524691 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CCDC190-204ENST00000524691 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
CCDC190-204ENST00000524691 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
CCDC190-204ENST00000524691 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms