RNA–Protein interactions for RNA: ENST00000524649.1

ARHGAP42-202, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 3

Gene ARHGAP42, Length 489 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-202ENST00000524649 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
ARHGAP42-202ENST00000524649 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
ARHGAP42-202ENST00000524649 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
ARHGAP42-202ENST00000524649 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
ARHGAP42-202ENST00000524649 FOXD1Q16676 465 aa21.6■■□□□ 1.05
ARHGAP42-202ENST00000524649 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
ARHGAP42-202ENST00000524649 MSH5O43196 834 aa20.58■□□□□ 0.89
ARHGAP42-202ENST00000524649 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
ARHGAP42-202ENST00000524649 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
ARHGAP42-202ENST00000524649 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
ARHGAP42-202ENST00000524649 ADRA2BP18089 450 aa19.66■□□□□ 0.74
ARHGAP42-202ENST00000524649 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
ARHGAP42-202ENST00000524649 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
ARHGAP42-202ENST00000524649 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
ARHGAP42-202ENST00000524649 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
ARHGAP42-202ENST00000524649 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
ARHGAP42-202ENST00000524649 HOXD11P31277 338 aaPredicted RBP17.49■□□□□ 0.39
ARHGAP42-202ENST00000524649 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
ARHGAP42-202ENST00000524649 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
ARHGAP42-202ENST00000524649 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
ARHGAP42-202ENST00000524649 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
ARHGAP42-202ENST00000524649 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
ARHGAP42-202ENST00000524649 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
ARHGAP42-202ENST00000524649 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
ARHGAP42-202ENST00000524649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
ARHGAP42-202ENST00000524649 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
ARHGAP42-202ENST00000524649 POTEHQ6S545 545 aa16.19■□□□□ 0.18
ARHGAP42-202ENST00000524649 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
ARHGAP42-202ENST00000524649 DSG3P32926 999 aa16.12■□□□□ 0.17
ARHGAP42-202ENST00000524649 CAPN15O75808 1086 aa16.09■□□□□ 0.17
ARHGAP42-202ENST00000524649 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
ARHGAP42-202ENST00000524649 APLP2Q06481 763 aa15.93■□□□□ 0.14
ARHGAP42-202ENST00000524649 ZNF219Q9P2Y4 722 aaPredicted RBP15.8■□□□□ 0.12
ARHGAP42-202ENST00000524649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
ARHGAP42-202ENST00000524649 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
ARHGAP42-202ENST00000524649 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
ARHGAP42-202ENST00000524649 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
ARHGAP42-202ENST00000524649 ABCB7O75027 752 aa15.6■□□□□ 0.09
ARHGAP42-202ENST00000524649 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
ARHGAP42-202ENST00000524649 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
ARHGAP42-202ENST00000524649 KCNA4P22459 653 aa15.53■□□□□ 0.08
ARHGAP42-202ENST00000524649 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
ARHGAP42-202ENST00000524649 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
ARHGAP42-202ENST00000524649 POLA2Q14181 598 aa15.18■□□□□ 0.02
ARHGAP42-202ENST00000524649 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
ARHGAP42-202ENST00000524649 AKT1S1Q96B36 256 aa15.03■□□□□ -0
ARHGAP42-202ENST00000524649 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
ARHGAP42-202ENST00000524649 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
ARHGAP42-202ENST00000524649 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
ARHGAP42-202ENST00000524649 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
ARHGAP42-202ENST00000524649 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
ARHGAP42-202ENST00000524649 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
ARHGAP42-202ENST00000524649 SLC4A1APQ9BWU0 796 aaKnown RBP14.67□□□□□ -0.06
ARHGAP42-202ENST00000524649 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
ARHGAP42-202ENST00000524649 HAX1O00165 279 aa14.64□□□□□ -0.07
ARHGAP42-202ENST00000524649 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
ARHGAP42-202ENST00000524649 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
ARHGAP42-202ENST00000524649 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
ARHGAP42-202ENST00000524649 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
ARHGAP42-202ENST00000524649 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
ARHGAP42-202ENST00000524649 FBLN2P98095 1184 aa14.38□□□□□ -0.11
ARHGAP42-202ENST00000524649 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
ARHGAP42-202ENST00000524649 EVX2Q03828 476 aa14.29□□□□□ -0.12
ARHGAP42-202ENST00000524649 ZBTB22O15209 634 aa14.28□□□□□ -0.12
ARHGAP42-202ENST00000524649 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
ARHGAP42-202ENST00000524649 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
ARHGAP42-202ENST00000524649 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
ARHGAP42-202ENST00000524649 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
ARHGAP42-202ENST00000524649 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
ARHGAP42-202ENST00000524649 GABBR2O75899 941 aa14.07□□□□□ -0.16
ARHGAP42-202ENST00000524649 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
ARHGAP42-202ENST00000524649 LHX8Q68G74 356 aa14.02□□□□□ -0.17
ARHGAP42-202ENST00000524649 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
ARHGAP42-202ENST00000524649 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
ARHGAP42-202ENST00000524649 CLCN6P51797 869 aa13.95□□□□□ -0.18
ARHGAP42-202ENST00000524649 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
ARHGAP42-202ENST00000524649 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
ARHGAP42-202ENST00000524649 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
ARHGAP42-202ENST00000524649 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
ARHGAP42-202ENST00000524649 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
ARHGAP42-202ENST00000524649 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
ARHGAP42-202ENST00000524649 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
ARHGAP42-202ENST00000524649 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
ARHGAP42-202ENST00000524649 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
ARHGAP42-202ENST00000524649 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
ARHGAP42-202ENST00000524649 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
ARHGAP42-202ENST00000524649 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
ARHGAP42-202ENST00000524649 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
ARHGAP42-202ENST00000524649 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
ARHGAP42-202ENST00000524649 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
ARHGAP42-202ENST00000524649 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
ARHGAP42-202ENST00000524649 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
ARHGAP42-202ENST00000524649 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
ARHGAP42-202ENST00000524649 POTEMA6NI47 508 aa13.21□□□□□ -0.29
ARHGAP42-202ENST00000524649 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
ARHGAP42-202ENST00000524649 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
ARHGAP42-202ENST00000524649 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
ARHGAP42-202ENST00000524649 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
ARHGAP42-202ENST00000524649 C7P10643 843 aa13.15□□□□□ -0.3
ARHGAP42-202ENST00000524649 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms