RNA–Protein interactions for RNA: ENST00000524641.1

RNPC3-203, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 4

Gene RNPC3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-203ENST00000524641 AEBP2Q6ZN18 517 aaPredicted RBP26.09■■□□□ 1.77
RNPC3-203ENST00000524641 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
RNPC3-203ENST00000524641 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
RNPC3-203ENST00000524641 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
RNPC3-203ENST00000524641 FOXD1Q16676 465 aa20.65■□□□□ 0.9
RNPC3-203ENST00000524641 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
RNPC3-203ENST00000524641 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
RNPC3-203ENST00000524641 ADRA2BP18089 450 aa19.59■□□□□ 0.73
RNPC3-203ENST00000524641 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
RNPC3-203ENST00000524641 MSH5O43196 834 aa19.18■□□□□ 0.66
RNPC3-203ENST00000524641 POTEDQ86YR6 584 aa18.99■□□□□ 0.63
RNPC3-203ENST00000524641 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
RNPC3-203ENST00000524641 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
RNPC3-203ENST00000524641 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
RNPC3-203ENST00000524641 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
RNPC3-203ENST00000524641 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
RNPC3-203ENST00000524641 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
RNPC3-203ENST00000524641 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
RNPC3-203ENST00000524641 RNF216Q9NWF9 866 aaPredicted RBP17.18■□□□□ 0.34
RNPC3-203ENST00000524641 KCNA4P22459 653 aa17.09■□□□□ 0.33
RNPC3-203ENST00000524641 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
RNPC3-203ENST00000524641 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
RNPC3-203ENST00000524641 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
RNPC3-203ENST00000524641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
RNPC3-203ENST00000524641 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
RNPC3-203ENST00000524641 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
RNPC3-203ENST00000524641 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
RNPC3-203ENST00000524641 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
RNPC3-203ENST00000524641 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
RNPC3-203ENST00000524641 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
RNPC3-203ENST00000524641 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
RNPC3-203ENST00000524641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
RNPC3-203ENST00000524641 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
RNPC3-203ENST00000524641 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
RNPC3-203ENST00000524641 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
RNPC3-203ENST00000524641 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
RNPC3-203ENST00000524641 ZBTB22O15209 634 aa15.71■□□□□ 0.11
RNPC3-203ENST00000524641 APLP2Q06481 763 aa15.71■□□□□ 0.11
RNPC3-203ENST00000524641 CAPN15O75808 1086 aa15.69■□□□□ 0.1
RNPC3-203ENST00000524641 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
RNPC3-203ENST00000524641 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
RNPC3-203ENST00000524641 DSG3P32926 999 aa15.49■□□□□ 0.07
RNPC3-203ENST00000524641 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
RNPC3-203ENST00000524641 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
RNPC3-203ENST00000524641 ABCB7O75027 752 aa15.35■□□□□ 0.05
RNPC3-203ENST00000524641 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
RNPC3-203ENST00000524641 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
RNPC3-203ENST00000524641 POLA2Q14181 598 aa15.21■□□□□ 0.03
RNPC3-203ENST00000524641 ZBTB12Q9Y330 459 aaPredicted RBP14.96□□□□□ -0.01
RNPC3-203ENST00000524641 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
RNPC3-203ENST00000524641 FBLN2P98095 1184 aa14.76□□□□□ -0.05
RNPC3-203ENST00000524641 POTEHQ6S545 545 aa14.71□□□□□ -0.05
RNPC3-203ENST00000524641 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
RNPC3-203ENST00000524641 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
RNPC3-203ENST00000524641 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
RNPC3-203ENST00000524641 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
RNPC3-203ENST00000524641 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
RNPC3-203ENST00000524641 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
RNPC3-203ENST00000524641 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
RNPC3-203ENST00000524641 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
RNPC3-203ENST00000524641 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
RNPC3-203ENST00000524641 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
RNPC3-203ENST00000524641 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
RNPC3-203ENST00000524641 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
RNPC3-203ENST00000524641 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
RNPC3-203ENST00000524641 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
RNPC3-203ENST00000524641 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
RNPC3-203ENST00000524641 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
RNPC3-203ENST00000524641 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
RNPC3-203ENST00000524641 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
RNPC3-203ENST00000524641 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
RNPC3-203ENST00000524641 FKBP8Q14318 412 aa13.92□□□□□ -0.18
RNPC3-203ENST00000524641 PROM2Q8N271 834 aa13.92□□□□□ -0.18
RNPC3-203ENST00000524641 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
RNPC3-203ENST00000524641 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
RNPC3-203ENST00000524641 HAX1O00165 279 aa13.69□□□□□ -0.22
RNPC3-203ENST00000524641 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
RNPC3-203ENST00000524641 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
RNPC3-203ENST00000524641 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
RNPC3-203ENST00000524641 EVX2Q03828 476 aa13.62□□□□□ -0.23
RNPC3-203ENST00000524641 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
RNPC3-203ENST00000524641 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
RNPC3-203ENST00000524641 MIER1Q8N108 512 aa13.52□□□□□ -0.25
RNPC3-203ENST00000524641 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
RNPC3-203ENST00000524641 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
RNPC3-203ENST00000524641 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
RNPC3-203ENST00000524641 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
RNPC3-203ENST00000524641 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
RNPC3-203ENST00000524641 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
RNPC3-203ENST00000524641 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
RNPC3-203ENST00000524641 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
RNPC3-203ENST00000524641 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
RNPC3-203ENST00000524641 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
RNPC3-203ENST00000524641 GABBR2O75899 941 aa13.25□□□□□ -0.29
RNPC3-203ENST00000524641 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
RNPC3-203ENST00000524641 CLCN6P51797 869 aa13.22□□□□□ -0.29
RNPC3-203ENST00000524641 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
RNPC3-203ENST00000524641 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
RNPC3-203ENST00000524641 NUBP1P53384 320 aa13.19□□□□□ -0.3
RNPC3-203ENST00000524641 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms