RNA–Protein interactions for RNA: ENST00000524574.5

VAV3-207, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene VAV3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-207ENST00000524574 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
VAV3-207ENST00000524574 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
VAV3-207ENST00000524574 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
VAV3-207ENST00000524574 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
VAV3-207ENST00000524574 FOXD1Q16676 465 aa20.53■□□□□ 0.88
VAV3-207ENST00000524574 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
VAV3-207ENST00000524574 MSH5O43196 834 aa19.41■□□□□ 0.7
VAV3-207ENST00000524574 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
VAV3-207ENST00000524574 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
VAV3-207ENST00000524574 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
VAV3-207ENST00000524574 ADRA2BP18089 450 aa18.74■□□□□ 0.59
VAV3-207ENST00000524574 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
VAV3-207ENST00000524574 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
VAV3-207ENST00000524574 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
VAV3-207ENST00000524574 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
VAV3-207ENST00000524574 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
VAV3-207ENST00000524574 RNF39Q9H2S5 420 aa16.5■□□□□ 0.23
VAV3-207ENST00000524574 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
VAV3-207ENST00000524574 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
VAV3-207ENST00000524574 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
VAV3-207ENST00000524574 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
VAV3-207ENST00000524574 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
VAV3-207ENST00000524574 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
VAV3-207ENST00000524574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
VAV3-207ENST00000524574 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
VAV3-207ENST00000524574 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
VAV3-207ENST00000524574 POTEHQ6S545 545 aa15.45■□□□□ 0.06
VAV3-207ENST00000524574 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
VAV3-207ENST00000524574 CAPN15O75808 1086 aa15.31■□□□□ 0.04
VAV3-207ENST00000524574 KCNA4P22459 653 aa15.31■□□□□ 0.04
VAV3-207ENST00000524574 DSG3P32926 999 aa15.3■□□□□ 0.04
VAV3-207ENST00000524574 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
VAV3-207ENST00000524574 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
VAV3-207ENST00000524574 ABCB7O75027 752 aa14.92□□□□□ -0.02
VAV3-207ENST00000524574 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
VAV3-207ENST00000524574 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
VAV3-207ENST00000524574 APLP2Q06481 763 aa14.86□□□□□ -0.03
VAV3-207ENST00000524574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
VAV3-207ENST00000524574 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
VAV3-207ENST00000524574 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
VAV3-207ENST00000524574 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
VAV3-207ENST00000524574 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
VAV3-207ENST00000524574 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
VAV3-207ENST00000524574 POLA2Q14181 598 aa14.39□□□□□ -0.11
VAV3-207ENST00000524574 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
VAV3-207ENST00000524574 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
VAV3-207ENST00000524574 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
VAV3-207ENST00000524574 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
VAV3-207ENST00000524574 ZBTB22O15209 634 aa14.1□□□□□ -0.15
VAV3-207ENST00000524574 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
VAV3-207ENST00000524574 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
VAV3-207ENST00000524574 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
VAV3-207ENST00000524574 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
VAV3-207ENST00000524574 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
VAV3-207ENST00000524574 HAX1O00165 279 aa13.96□□□□□ -0.17
VAV3-207ENST00000524574 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
VAV3-207ENST00000524574 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
VAV3-207ENST00000524574 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
VAV3-207ENST00000524574 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
VAV3-207ENST00000524574 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
VAV3-207ENST00000524574 EVX2Q03828 476 aa13.71□□□□□ -0.21
VAV3-207ENST00000524574 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
VAV3-207ENST00000524574 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
VAV3-207ENST00000524574 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
VAV3-207ENST00000524574 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
VAV3-207ENST00000524574 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
VAV3-207ENST00000524574 FBLN2P98095 1184 aa13.51□□□□□ -0.25
VAV3-207ENST00000524574 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
VAV3-207ENST00000524574 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
VAV3-207ENST00000524574 GABBR2O75899 941 aa13.38□□□□□ -0.27
VAV3-207ENST00000524574 LHX8Q68G74 356 aa13.35□□□□□ -0.27
VAV3-207ENST00000524574 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
VAV3-207ENST00000524574 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
VAV3-207ENST00000524574 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
VAV3-207ENST00000524574 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
VAV3-207ENST00000524574 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
VAV3-207ENST00000524574 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
VAV3-207ENST00000524574 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
VAV3-207ENST00000524574 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
VAV3-207ENST00000524574 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
VAV3-207ENST00000524574 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
VAV3-207ENST00000524574 CLCN6P51797 869 aa12.94□□□□□ -0.34
VAV3-207ENST00000524574 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
VAV3-207ENST00000524574 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
VAV3-207ENST00000524574 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
VAV3-207ENST00000524574 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
VAV3-207ENST00000524574 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
VAV3-207ENST00000524574 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
VAV3-207ENST00000524574 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
VAV3-207ENST00000524574 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
VAV3-207ENST00000524574 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
VAV3-207ENST00000524574 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
VAV3-207ENST00000524574 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
VAV3-207ENST00000524574 POTEMA6NI47 508 aa12.61□□□□□ -0.39
VAV3-207ENST00000524574 FKBP8Q14318 412 aa12.56□□□□□ -0.4
VAV3-207ENST00000524574 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
VAV3-207ENST00000524574 PROM2Q8N271 834 aa12.54□□□□□ -0.4
VAV3-207ENST00000524574 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
VAV3-207ENST00000524574 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
VAV3-207ENST00000524574 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms