RNA–Protein interactions for RNA: ENST00000524471.1

CCDC15-202, Transcript of coiled-coil domain containing 15, humanhuman

TSL 3

Gene CCDC15, Length 1,161 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15-202ENST00000524471 AEBP2Q6ZN18 517 aaPredicted RBP33.45■■■□□ 2.95
CCDC15-202ENST00000524471 CHIC1Q5VXU3 224 aa32.2■■■□□ 2.75
CCDC15-202ENST00000524471 SENP3Q9H4L4 574 aaPredicted RBP28.65■■■□□ 2.18
CCDC15-202ENST00000524471 PHF23Q9BUL5 403 aaPredicted RBP28.26■■■□□ 2.11
CCDC15-202ENST00000524471 FOXD1Q16676 465 aa26.56■■□□□ 1.84
CCDC15-202ENST00000524471 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
CCDC15-202ENST00000524471 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
CCDC15-202ENST00000524471 ADRA2BP18089 450 aa25.02■■□□□ 1.6
CCDC15-202ENST00000524471 PIAS4Q8N2W9 510 aaPredicted RBP24.97■■□□□ 1.59
CCDC15-202ENST00000524471 MSH5O43196 834 aa24.85■■□□□ 1.57
CCDC15-202ENST00000524471 POTEDQ86YR6 584 aa23.57■■□□□ 1.36
CCDC15-202ENST00000524471 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.29
CCDC15-202ENST00000524471 MAPK8IP2Q13387 824 aaPredicted RBP22.86■■□□□ 1.25
CCDC15-202ENST00000524471 PPP4R3CPQ6ZMV5 832 aa22.75■■□□□ 1.23
CCDC15-202ENST00000524471 DMRT2Q9Y5R5 561 aa22.73■■□□□ 1.23
CCDC15-202ENST00000524471 CNKSR2Q8WXI2 1034 aa22.28■■□□□ 1.16
CCDC15-202ENST00000524471 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
CCDC15-202ENST00000524471 HOXD11P31277 338 aaPredicted RBP22.02■■□□□ 1.12
CCDC15-202ENST00000524471 RNF216Q9NWF9 866 aaPredicted RBP21.98■■□□□ 1.11
CCDC15-202ENST00000524471 DCAF8L1A6NGE4 600 aa21.84■■□□□ 1.09
CCDC15-202ENST00000524471 NPM3O75607 178 aaKnown RBP21.63■■□□□ 1.05
CCDC15-202ENST00000524471 KCNA4P22459 653 aa21.49■■□□□ 1.03
CCDC15-202ENST00000524471 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
CCDC15-202ENST00000524471 RNF39Q9H2S5 420 aa21.16■□□□□ 0.98
CCDC15-202ENST00000524471 CACNB1Q02641 598 aaPredicted RBP21.1■□□□□ 0.97
CCDC15-202ENST00000524471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.96
CCDC15-202ENST00000524471 C1QBPQ07021 282 aaKnown RBP20.93■□□□□ 0.94
CCDC15-202ENST00000524471 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
CCDC15-202ENST00000524471 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
CCDC15-202ENST00000524471 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
CCDC15-202ENST00000524471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
CCDC15-202ENST00000524471 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
CCDC15-202ENST00000524471 APLP2Q06481 763 aa20.23■□□□□ 0.83
CCDC15-202ENST00000524471 CAPN15O75808 1086 aa20.19■□□□□ 0.82
CCDC15-202ENST00000524471 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
CCDC15-202ENST00000524471 SAMD1Q6SPF0 538 aaPredicted RBP20.12■□□□□ 0.81
CCDC15-202ENST00000524471 MYCNP04198 464 aaPredicted RBP20.08■□□□□ 0.81
CCDC15-202ENST00000524471 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
CCDC15-202ENST00000524471 ZNF219Q9P2Y4 722 aaPredicted RBP19.96■□□□□ 0.79
CCDC15-202ENST00000524471 TRHP20396 242 aaPredicted RBP19.93■□□□□ 0.78
CCDC15-202ENST00000524471 DSG3P32926 999 aa19.92■□□□□ 0.78
CCDC15-202ENST00000524471 ZBTB22O15209 634 aa19.7■□□□□ 0.74
CCDC15-202ENST00000524471 ABCB7O75027 752 aa19.69■□□□□ 0.74
CCDC15-202ENST00000524471 POLA2Q14181 598 aa19.46■□□□□ 0.71
CCDC15-202ENST00000524471 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
CCDC15-202ENST00000524471 ATXN8OSP0DMR3 200 aa19.43■□□□□ 0.7
CCDC15-202ENST00000524471 ZBTB12Q9Y330 459 aaPredicted RBP19.2■□□□□ 0.66
CCDC15-202ENST00000524471 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
CCDC15-202ENST00000524471 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
CCDC15-202ENST00000524471 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
CCDC15-202ENST00000524471 FBLN2P98095 1184 aa18.86■□□□□ 0.61
CCDC15-202ENST00000524471 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
CCDC15-202ENST00000524471 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
CCDC15-202ENST00000524471 MKRN4PQ13434 485 aaPredicted RBP18.58■□□□□ 0.56
CCDC15-202ENST00000524471 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
CCDC15-202ENST00000524471 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
CCDC15-202ENST00000524471 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
CCDC15-202ENST00000524471 POTEHQ6S545 545 aa18.57■□□□□ 0.56
CCDC15-202ENST00000524471 CHRDL2Q6WN34 429 aa18.49■□□□□ 0.55
CCDC15-202ENST00000524471 REM2Q8IYK8 340 aaPredicted RBP18.48■□□□□ 0.55
CCDC15-202ENST00000524471 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
CCDC15-202ENST00000524471 SSUH2Q9Y2M2 353 aa18.3■□□□□ 0.52
CCDC15-202ENST00000524471 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
CCDC15-202ENST00000524471 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
CCDC15-202ENST00000524471 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
CCDC15-202ENST00000524471 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC15-202ENST00000524471 PIP4P2Q8N4L2 257 aa18.09■□□□□ 0.49
CCDC15-202ENST00000524471 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC15-202ENST00000524471 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
CCDC15-202ENST00000524471 PRR29P0C7W0 189 aa17.88■□□□□ 0.45
CCDC15-202ENST00000524471 PRKAR2AP13861 404 aaKnown RBP17.84■□□□□ 0.45
CCDC15-202ENST00000524471 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
CCDC15-202ENST00000524471 HAX1O00165 279 aa17.73■□□□□ 0.43
CCDC15-202ENST00000524471 CHADLQ6NUI6 762 aa17.65■□□□□ 0.42
CCDC15-202ENST00000524471 SP7Q8TDD2 431 aaPredicted RBP17.58■□□□□ 0.4
CCDC15-202ENST00000524471 PROM2Q8N271 834 aa17.53■□□□□ 0.4
CCDC15-202ENST00000524471 FARP1Q9Y4F1 1045 aaPredicted RBP17.48■□□□□ 0.39
CCDC15-202ENST00000524471 C19orf67A6NJJ6 358 aa17.46■□□□□ 0.39
CCDC15-202ENST00000524471 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
CCDC15-202ENST00000524471 FKBP8Q14318 412 aa17.41■□□□□ 0.38
CCDC15-202ENST00000524471 EVX2Q03828 476 aa17.39■□□□□ 0.37
CCDC15-202ENST00000524471 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
CCDC15-202ENST00000524471 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC15-202ENST00000524471 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
CCDC15-202ENST00000524471 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
CCDC15-202ENST00000524471 MIER1Q8N108 512 aa17.15■□□□□ 0.34
CCDC15-202ENST00000524471 MNX1P50219 401 aaPredicted RBP17.13■□□□□ 0.33
CCDC15-202ENST00000524471 GABBR2O75899 941 aa17.11■□□□□ 0.33
CCDC15-202ENST00000524471 CLCN6P51797 869 aa17.11■□□□□ 0.33
CCDC15-202ENST00000524471 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
CCDC15-202ENST00000524471 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.32
CCDC15-202ENST00000524471 FBXO3Q9UK99 471 aa17.07■□□□□ 0.32
CCDC15-202ENST00000524471 ZNF579Q8NAF0 562 aaKnown RBP17.04■□□□□ 0.32
CCDC15-202ENST00000524471 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
CCDC15-202ENST00000524471 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
CCDC15-202ENST00000524471 PHF12Q96QT6 1004 aa16.85■□□□□ 0.29
CCDC15-202ENST00000524471 DCBLD2Q96PD2 775 aa16.82■□□□□ 0.28
CCDC15-202ENST00000524471 VASPP50552 380 aaPredicted RBP16.76■□□□□ 0.27
CCDC15-202ENST00000524471 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
CCDC15-202ENST00000524471 GALR2O43603 387 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms