RNA–Protein interactions for RNA: ENST00000524233.1

RNF19A-215, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RNF19A, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-215ENST00000524233 AEBP2Q6ZN18 517 aaPredicted RBP32.53■■■□□ 2.8
RNF19A-215ENST00000524233 CHIC1Q5VXU3 224 aa31.3■■■□□ 2.6
RNF19A-215ENST00000524233 SENP3Q9H4L4 574 aaPredicted RBP27.69■■■□□ 2.02
RNF19A-215ENST00000524233 PHF23Q9BUL5 403 aaPredicted RBP27.46■■□□□ 1.99
RNF19A-215ENST00000524233 FOXD1Q16676 465 aa25.75■■□□□ 1.71
RNF19A-215ENST00000524233 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
RNF19A-215ENST00000524233 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
RNF19A-215ENST00000524233 ADRA2BP18089 450 aa24.35■■□□□ 1.49
RNF19A-215ENST00000524233 PIAS4Q8N2W9 510 aaPredicted RBP24.2■■□□□ 1.46
RNF19A-215ENST00000524233 MSH5O43196 834 aa23.94■■□□□ 1.42
RNF19A-215ENST00000524233 POTEDQ86YR6 584 aa22.65■■□□□ 1.22
RNF19A-215ENST00000524233 SCAF1Q9H7N4 1312 aaKnown RBP22.29■■□□□ 1.16
RNF19A-215ENST00000524233 MAPK8IP2Q13387 824 aaPredicted RBP22.24■■□□□ 1.15
RNF19A-215ENST00000524233 PPP4R3CPQ6ZMV5 832 aa22.15■■□□□ 1.14
RNF19A-215ENST00000524233 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
RNF19A-215ENST00000524233 CNKSR2Q8WXI2 1034 aa21.64■■□□□ 1.05
RNF19A-215ENST00000524233 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
RNF19A-215ENST00000524233 HOXD11P31277 338 aaPredicted RBP21.37■■□□□ 1.01
RNF19A-215ENST00000524233 RNF216Q9NWF9 866 aaPredicted RBP21.33■■□□□ 1.01
RNF19A-215ENST00000524233 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
RNF19A-215ENST00000524233 NPM3O75607 178 aaKnown RBP21.12■□□□□ 0.97
RNF19A-215ENST00000524233 KCNA4P22459 653 aa21.1■□□□□ 0.97
RNF19A-215ENST00000524233 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
RNF19A-215ENST00000524233 RNF39Q9H2S5 420 aa20.46■□□□□ 0.87
RNF19A-215ENST00000524233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.85
RNF19A-215ENST00000524233 CACNB1Q02641 598 aaPredicted RBP20.3■□□□□ 0.84
RNF19A-215ENST00000524233 C1QBPQ07021 282 aaKnown RBP20.18■□□□□ 0.82
RNF19A-215ENST00000524233 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
RNF19A-215ENST00000524233 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
RNF19A-215ENST00000524233 U3KPZ7 1027 aaPredicted RBP20■□□□□ 0.79
RNF19A-215ENST00000524233 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
RNF19A-215ENST00000524233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
RNF19A-215ENST00000524233 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
RNF19A-215ENST00000524233 FOXD4L1Q9NU39 408 aa19.56■□□□□ 0.72
RNF19A-215ENST00000524233 CAPN15O75808 1086 aa19.55■□□□□ 0.72
RNF19A-215ENST00000524233 MYCNP04198 464 aaPredicted RBP19.53■□□□□ 0.72
RNF19A-215ENST00000524233 APLP2Q06481 763 aa19.49■□□□□ 0.71
RNF19A-215ENST00000524233 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
RNF19A-215ENST00000524233 ZBTB22O15209 634 aa19.4■□□□□ 0.7
RNF19A-215ENST00000524233 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
RNF19A-215ENST00000524233 DSG3P32926 999 aa19.31■□□□□ 0.68
RNF19A-215ENST00000524233 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
RNF19A-215ENST00000524233 ABCB7O75027 752 aa19.14■□□□□ 0.65
RNF19A-215ENST00000524233 ATF5Q9Y2D1 282 aaPredicted RBP19.04■□□□□ 0.64
RNF19A-215ENST00000524233 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
RNF19A-215ENST00000524233 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
RNF19A-215ENST00000524233 POLA2Q14181 598 aa18.89■□□□□ 0.61
RNF19A-215ENST00000524233 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
RNF19A-215ENST00000524233 ZBTB12Q9Y330 459 aaPredicted RBP18.55■□□□□ 0.56
RNF19A-215ENST00000524233 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
RNF19A-215ENST00000524233 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
RNF19A-215ENST00000524233 FBLN2P98095 1184 aa18.29■□□□□ 0.52
RNF19A-215ENST00000524233 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
RNF19A-215ENST00000524233 AKT1S1Q96B36 256 aa18.08■□□□□ 0.48
RNF19A-215ENST00000524233 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
RNF19A-215ENST00000524233 SPDYE6P0CI01 402 aa18■□□□□ 0.47
RNF19A-215ENST00000524233 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
RNF19A-215ENST00000524233 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
RNF19A-215ENST00000524233 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
RNF19A-215ENST00000524233 CHRDL2Q6WN34 429 aa17.85■□□□□ 0.45
RNF19A-215ENST00000524233 POTEHQ6S545 545 aa17.83■□□□□ 0.44
RNF19A-215ENST00000524233 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
RNF19A-215ENST00000524233 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
RNF19A-215ENST00000524233 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
RNF19A-215ENST00000524233 SPDYE1Q8NFV5 336 aaPredicted RBP17.59■□□□□ 0.41
RNF19A-215ENST00000524233 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
RNF19A-215ENST00000524233 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
RNF19A-215ENST00000524233 PIP4P2Q8N4L2 257 aa17.52■□□□□ 0.4
RNF19A-215ENST00000524233 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
RNF19A-215ENST00000524233 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
RNF19A-215ENST00000524233 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
RNF19A-215ENST00000524233 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
RNF19A-215ENST00000524233 CHADLQ6NUI6 762 aa17.18■□□□□ 0.34
RNF19A-215ENST00000524233 PROM2Q8N271 834 aa17.17■□□□□ 0.34
RNF19A-215ENST00000524233 FKBP8Q14318 412 aa17.13■□□□□ 0.33
RNF19A-215ENST00000524233 HAX1O00165 279 aa17.09■□□□□ 0.33
RNF19A-215ENST00000524233 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
RNF19A-215ENST00000524233 FARP1Q9Y4F1 1045 aaPredicted RBP16.95■□□□□ 0.3
RNF19A-215ENST00000524233 SP7Q8TDD2 431 aaPredicted RBP16.92■□□□□ 0.3
RNF19A-215ENST00000524233 C19orf67A6NJJ6 358 aa16.9■□□□□ 0.3
RNF19A-215ENST00000524233 EVX2Q03828 476 aa16.89■□□□□ 0.29
RNF19A-215ENST00000524233 CD44P16070 742 aaKnown RBP16.76■□□□□ 0.27
RNF19A-215ENST00000524233 MNX1P50219 401 aaPredicted RBP16.72■□□□□ 0.27
RNF19A-215ENST00000524233 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
RNF19A-215ENST00000524233 MIER1Q8N108 512 aa16.69■□□□□ 0.26
RNF19A-215ENST00000524233 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
RNF19A-215ENST00000524233 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
RNF19A-215ENST00000524233 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
RNF19A-215ENST00000524233 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
RNF19A-215ENST00000524233 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
RNF19A-215ENST00000524233 GABBR2O75899 941 aa16.54■□□□□ 0.24
RNF19A-215ENST00000524233 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
RNF19A-215ENST00000524233 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
RNF19A-215ENST00000524233 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
RNF19A-215ENST00000524233 TSPYL2Q9H2G4 693 aaPredicted RBP16.42■□□□□ 0.22
RNF19A-215ENST00000524233 CLCN6P51797 869 aa16.41■□□□□ 0.22
RNF19A-215ENST00000524233 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
RNF19A-215ENST00000524233 RASEFQ8IZ41 740 aa16.37■□□□□ 0.21
RNF19A-215ENST00000524233 NUBP1P53384 320 aa16.31■□□□□ 0.2
RNF19A-215ENST00000524233 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms