RNA–Protein interactions for RNA: ENST00000524224.5

CCNE2-208, Transcript of cyclin E2, humanhuman

TSL 3

Gene CCNE2, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-208ENST00000524224 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
CCNE2-208ENST00000524224 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
CCNE2-208ENST00000524224 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
CCNE2-208ENST00000524224 PHF23Q9BUL5 403 aaPredicted RBP26.64■■□□□ 1.86
CCNE2-208ENST00000524224 FOXD1Q16676 465 aa25.16■■□□□ 1.62
CCNE2-208ENST00000524224 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
CCNE2-208ENST00000524224 MSH5O43196 834 aa23.67■■□□□ 1.38
CCNE2-208ENST00000524224 PIAS4Q8N2W9 510 aaPredicted RBP23.52■■□□□ 1.36
CCNE2-208ENST00000524224 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
CCNE2-208ENST00000524224 ADRA2BP18089 450 aa23.34■■□□□ 1.33
CCNE2-208ENST00000524224 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
CCNE2-208ENST00000524224 SCAF1Q9H7N4 1312 aaKnown RBP21.47■■□□□ 1.03
CCNE2-208ENST00000524224 MAPK8IP2Q13387 824 aaPredicted RBP21.45■■□□□ 1.02
CCNE2-208ENST00000524224 DMRT2Q9Y5R5 561 aa21.42■■□□□ 1.02
CCNE2-208ENST00000524224 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
CCNE2-208ENST00000524224 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
CCNE2-208ENST00000524224 CNKSR2Q8WXI2 1034 aa20.58■□□□□ 0.89
CCNE2-208ENST00000524224 DCAF8L1A6NGE4 600 aa20.53■□□□□ 0.88
CCNE2-208ENST00000524224 RNF216Q9NWF9 866 aaPredicted RBP20.42■□□□□ 0.86
CCNE2-208ENST00000524224 CACNB1Q02641 598 aaPredicted RBP20.35■□□□□ 0.85
CCNE2-208ENST00000524224 RNF39Q9H2S5 420 aa20.15■□□□□ 0.82
CCNE2-208ENST00000524224 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
CCNE2-208ENST00000524224 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
CCNE2-208ENST00000524224 C1QBPQ07021 282 aaKnown RBP19.88■□□□□ 0.77
CCNE2-208ENST00000524224 NPM3O75607 178 aaKnown RBP19.77■□□□□ 0.76
CCNE2-208ENST00000524224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCNE2-208ENST00000524224 KCNA4P22459 653 aa19.27■□□□□ 0.68
CCNE2-208ENST00000524224 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
CCNE2-208ENST00000524224 CAPN15O75808 1086 aa18.92■□□□□ 0.62
CCNE2-208ENST00000524224 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
CCNE2-208ENST00000524224 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
CCNE2-208ENST00000524224 DSG3P32926 999 aa18.82■□□□□ 0.6
CCNE2-208ENST00000524224 APLP2Q06481 763 aa18.74■□□□□ 0.59
CCNE2-208ENST00000524224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
CCNE2-208ENST00000524224 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
CCNE2-208ENST00000524224 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
CCNE2-208ENST00000524224 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
CCNE2-208ENST00000524224 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
CCNE2-208ENST00000524224 ABCB7O75027 752 aa18.44■□□□□ 0.54
CCNE2-208ENST00000524224 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
CCNE2-208ENST00000524224 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
CCNE2-208ENST00000524224 POTEHQ6S545 545 aa18.19■□□□□ 0.5
CCNE2-208ENST00000524224 FOXD4L1Q9NU39 408 aa18.08■□□□□ 0.48
CCNE2-208ENST00000524224 POLA2Q14181 598 aa18.05■□□□□ 0.48
CCNE2-208ENST00000524224 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
CCNE2-208ENST00000524224 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
CCNE2-208ENST00000524224 ZBTB12Q9Y330 459 aaPredicted RBP17.76■□□□□ 0.43
CCNE2-208ENST00000524224 ZBTB22O15209 634 aa17.69■□□□□ 0.42
CCNE2-208ENST00000524224 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
CCNE2-208ENST00000524224 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
CCNE2-208ENST00000524224 ATXN8OSP0DMR3 200 aa17.56■□□□□ 0.4
CCNE2-208ENST00000524224 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
CCNE2-208ENST00000524224 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
CCNE2-208ENST00000524224 FBLN2P98095 1184 aa17.25■□□□□ 0.35
CCNE2-208ENST00000524224 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
CCNE2-208ENST00000524224 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
CCNE2-208ENST00000524224 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
CCNE2-208ENST00000524224 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
CCNE2-208ENST00000524224 PIP4P2Q8N4L2 257 aa17.17■□□□□ 0.34
CCNE2-208ENST00000524224 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCNE2-208ENST00000524224 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
CCNE2-208ENST00000524224 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
CCNE2-208ENST00000524224 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
CCNE2-208ENST00000524224 HAX1O00165 279 aa16.9■□□□□ 0.3
CCNE2-208ENST00000524224 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
CCNE2-208ENST00000524224 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
CCNE2-208ENST00000524224 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
CCNE2-208ENST00000524224 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
CCNE2-208ENST00000524224 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
CCNE2-208ENST00000524224 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCNE2-208ENST00000524224 EVX2Q03828 476 aa16.62■□□□□ 0.25
CCNE2-208ENST00000524224 PRR29P0C7W0 189 aa16.56■□□□□ 0.24
CCNE2-208ENST00000524224 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
CCNE2-208ENST00000524224 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
CCNE2-208ENST00000524224 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
CCNE2-208ENST00000524224 GABBR2O75899 941 aa16.29■□□□□ 0.2
CCNE2-208ENST00000524224 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
CCNE2-208ENST00000524224 STAG3Q9UJ98 1225 aa16.24■□□□□ 0.19
CCNE2-208ENST00000524224 CD44P16070 742 aaKnown RBP16.22■□□□□ 0.19
CCNE2-208ENST00000524224 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
CCNE2-208ENST00000524224 CLCN6P51797 869 aa16.1■□□□□ 0.17
CCNE2-208ENST00000524224 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
CCNE2-208ENST00000524224 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
CCNE2-208ENST00000524224 LHX8Q68G74 356 aa15.96■□□□□ 0.15
CCNE2-208ENST00000524224 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
CCNE2-208ENST00000524224 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
CCNE2-208ENST00000524224 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
CCNE2-208ENST00000524224 DCBLD2Q96PD2 775 aa15.87■□□□□ 0.13
CCNE2-208ENST00000524224 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
CCNE2-208ENST00000524224 PROM2Q8N271 834 aa15.8■□□□□ 0.12
CCNE2-208ENST00000524224 MNX1P50219 401 aaPredicted RBP15.79■□□□□ 0.12
CCNE2-208ENST00000524224 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
CCNE2-208ENST00000524224 PHF12Q96QT6 1004 aa15.71■□□□□ 0.11
CCNE2-208ENST00000524224 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
CCNE2-208ENST00000524224 MS4A3Q96HJ5 214 aa15.51■□□□□ 0.07
CCNE2-208ENST00000524224 TSPYL2Q9H2G4 693 aaPredicted RBP15.51■□□□□ 0.07
CCNE2-208ENST00000524224 MIER1Q8N108 512 aa15.48■□□□□ 0.07
CCNE2-208ENST00000524224 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
CCNE2-208ENST00000524224 ASTLQ6HA08 431 aaPredicted RBP15.44■□□□□ 0.06
CCNE2-208ENST00000524224 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms