RNA–Protein interactions for RNA: ENST00000523569.1

CHRAC1-205, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 2

Gene CHRAC1, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-205ENST00000523569 AEBP2Q6ZN18 517 aaPredicted RBP27■■□□□ 1.91
CHRAC1-205ENST00000523569 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
CHRAC1-205ENST00000523569 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
CHRAC1-205ENST00000523569 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
CHRAC1-205ENST00000523569 FOXD1Q16676 465 aa21.5■■□□□ 1.03
CHRAC1-205ENST00000523569 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
CHRAC1-205ENST00000523569 MSH5O43196 834 aa20.18■□□□□ 0.82
CHRAC1-205ENST00000523569 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
CHRAC1-205ENST00000523569 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
CHRAC1-205ENST00000523569 POTEDQ86YR6 584 aa19.98■□□□□ 0.79
CHRAC1-205ENST00000523569 ADRA2BP18089 450 aa19.9■□□□□ 0.78
CHRAC1-205ENST00000523569 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
CHRAC1-205ENST00000523569 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
CHRAC1-205ENST00000523569 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
CHRAC1-205ENST00000523569 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
CHRAC1-205ENST00000523569 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
CHRAC1-205ENST00000523569 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
CHRAC1-205ENST00000523569 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
CHRAC1-205ENST00000523569 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
CHRAC1-205ENST00000523569 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
CHRAC1-205ENST00000523569 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
CHRAC1-205ENST00000523569 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
CHRAC1-205ENST00000523569 KCNA4P22459 653 aa17.05■□□□□ 0.32
CHRAC1-205ENST00000523569 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
CHRAC1-205ENST00000523569 C1QBPQ07021 282 aaKnown RBP16.95■□□□□ 0.3
CHRAC1-205ENST00000523569 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
CHRAC1-205ENST00000523569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHRAC1-205ENST00000523569 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
CHRAC1-205ENST00000523569 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
CHRAC1-205ENST00000523569 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
CHRAC1-205ENST00000523569 CAPN15O75808 1086 aa16.09■□□□□ 0.17
CHRAC1-205ENST00000523569 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
CHRAC1-205ENST00000523569 DSG3P32926 999 aa16.07■□□□□ 0.16
CHRAC1-205ENST00000523569 APLP2Q06481 763 aa15.84■□□□□ 0.13
CHRAC1-205ENST00000523569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
CHRAC1-205ENST00000523569 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
CHRAC1-205ENST00000523569 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
CHRAC1-205ENST00000523569 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
CHRAC1-205ENST00000523569 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
CHRAC1-205ENST00000523569 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
CHRAC1-205ENST00000523569 ABCB7O75027 752 aa15.7■□□□□ 0.1
CHRAC1-205ENST00000523569 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
CHRAC1-205ENST00000523569 ZBTB22O15209 634 aa15.67■□□□□ 0.1
CHRAC1-205ENST00000523569 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
CHRAC1-205ENST00000523569 POTEHQ6S545 545 aa15.62■□□□□ 0.09
CHRAC1-205ENST00000523569 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
CHRAC1-205ENST00000523569 POLA2Q14181 598 aa15.35■□□□□ 0.05
CHRAC1-205ENST00000523569 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
CHRAC1-205ENST00000523569 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
CHRAC1-205ENST00000523569 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
CHRAC1-205ENST00000523569 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
CHRAC1-205ENST00000523569 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
CHRAC1-205ENST00000523569 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
CHRAC1-205ENST00000523569 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
CHRAC1-205ENST00000523569 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
CHRAC1-205ENST00000523569 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
CHRAC1-205ENST00000523569 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
CHRAC1-205ENST00000523569 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHRAC1-205ENST00000523569 FBLN2P98095 1184 aa14.57□□□□□ -0.08
CHRAC1-205ENST00000523569 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
CHRAC1-205ENST00000523569 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
CHRAC1-205ENST00000523569 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
CHRAC1-205ENST00000523569 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
CHRAC1-205ENST00000523569 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
CHRAC1-205ENST00000523569 HAX1O00165 279 aa14.42□□□□□ -0.1
CHRAC1-205ENST00000523569 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
CHRAC1-205ENST00000523569 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
CHRAC1-205ENST00000523569 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
CHRAC1-205ENST00000523569 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
CHRAC1-205ENST00000523569 EVX2Q03828 476 aa14.26□□□□□ -0.13
CHRAC1-205ENST00000523569 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
CHRAC1-205ENST00000523569 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHRAC1-205ENST00000523569 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
CHRAC1-205ENST00000523569 C19orf67A6NJJ6 358 aa14.1□□□□□ -0.15
CHRAC1-205ENST00000523569 FKBP8Q14318 412 aa14.1□□□□□ -0.15
CHRAC1-205ENST00000523569 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
CHRAC1-205ENST00000523569 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
CHRAC1-205ENST00000523569 PROM2Q8N271 834 aa13.99□□□□□ -0.17
CHRAC1-205ENST00000523569 GABBR2O75899 941 aa13.93□□□□□ -0.18
CHRAC1-205ENST00000523569 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
CHRAC1-205ENST00000523569 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
CHRAC1-205ENST00000523569 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
CHRAC1-205ENST00000523569 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
CHRAC1-205ENST00000523569 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
CHRAC1-205ENST00000523569 CLCN6P51797 869 aa13.67□□□□□ -0.22
CHRAC1-205ENST00000523569 LHX8Q68G74 356 aa13.66□□□□□ -0.22
CHRAC1-205ENST00000523569 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
CHRAC1-205ENST00000523569 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
CHRAC1-205ENST00000523569 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
CHRAC1-205ENST00000523569 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
CHRAC1-205ENST00000523569 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
CHRAC1-205ENST00000523569 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
CHRAC1-205ENST00000523569 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
CHRAC1-205ENST00000523569 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
CHRAC1-205ENST00000523569 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHRAC1-205ENST00000523569 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
CHRAC1-205ENST00000523569 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CHRAC1-205ENST00000523569 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
CHRAC1-205ENST00000523569 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
CHRAC1-205ENST00000523569 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms