RNA–Protein interactions for RNA: ENST00000523003.5

GTF2H2-213, Transcript of general transcription factor IIH subunit 2, humanhuman

TSL 1 (best)

Gene GTF2H2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H2-213ENST00000523003 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
GTF2H2-213ENST00000523003 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
GTF2H2-213ENST00000523003 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
GTF2H2-213ENST00000523003 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
GTF2H2-213ENST00000523003 FOXD1Q16676 465 aa22.76■■□□□ 1.23
GTF2H2-213ENST00000523003 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
GTF2H2-213ENST00000523003 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
GTF2H2-213ENST00000523003 MSH5O43196 834 aa21.17■□□□□ 0.98
GTF2H2-213ENST00000523003 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
GTF2H2-213ENST00000523003 PIAS4Q8N2W9 510 aaPredicted RBP21.12■□□□□ 0.97
GTF2H2-213ENST00000523003 ADRA2BP18089 450 aa21.1■□□□□ 0.97
GTF2H2-213ENST00000523003 MAPK8IP2Q13387 824 aaPredicted RBP19.48■□□□□ 0.71
GTF2H2-213ENST00000523003 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
GTF2H2-213ENST00000523003 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
GTF2H2-213ENST00000523003 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
GTF2H2-213ENST00000523003 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
GTF2H2-213ENST00000523003 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
GTF2H2-213ENST00000523003 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
GTF2H2-213ENST00000523003 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
GTF2H2-213ENST00000523003 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
GTF2H2-213ENST00000523003 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
GTF2H2-213ENST00000523003 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
GTF2H2-213ENST00000523003 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
GTF2H2-213ENST00000523003 KCNA4P22459 653 aa18.07■□□□□ 0.48
GTF2H2-213ENST00000523003 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
GTF2H2-213ENST00000523003 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
GTF2H2-213ENST00000523003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.413e-7■■■□□ 15.2
GTF2H2-213ENST00000523003 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
GTF2H2-213ENST00000523003 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
GTF2H2-213ENST00000523003 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
GTF2H2-213ENST00000523003 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
GTF2H2-213ENST00000523003 DSG3P32926 999 aa16.98■□□□□ 0.31
GTF2H2-213ENST00000523003 CAPN15O75808 1086 aa16.93■□□□□ 0.3
GTF2H2-213ENST00000523003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
GTF2H2-213ENST00000523003 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
GTF2H2-213ENST00000523003 APLP2Q06481 763 aa16.84■□□□□ 0.29
GTF2H2-213ENST00000523003 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
GTF2H2-213ENST00000523003 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
GTF2H2-213ENST00000523003 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
GTF2H2-213ENST00000523003 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
GTF2H2-213ENST00000523003 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
GTF2H2-213ENST00000523003 ABCB7O75027 752 aa16.62■□□□□ 0.25
GTF2H2-213ENST00000523003 ZBTB22O15209 634 aa16.61■□□□□ 0.25
GTF2H2-213ENST00000523003 POTEHQ6S545 545 aa16.47■□□□□ 0.23
GTF2H2-213ENST00000523003 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
GTF2H2-213ENST00000523003 POLA2Q14181 598 aa16.34■□□□□ 0.21
GTF2H2-213ENST00000523003 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
GTF2H2-213ENST00000523003 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
GTF2H2-213ENST00000523003 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
GTF2H2-213ENST00000523003 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
GTF2H2-213ENST00000523003 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
GTF2H2-213ENST00000523003 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
GTF2H2-213ENST00000523003 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
GTF2H2-213ENST00000523003 FBLN2P98095 1184 aa15.74■□□□□ 0.11
GTF2H2-213ENST00000523003 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
GTF2H2-213ENST00000523003 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
GTF2H2-213ENST00000523003 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
GTF2H2-213ENST00000523003 SPDYE2BA6NHP3 402 aa15.56■□□□□ 0.08
GTF2H2-213ENST00000523003 SPDYE6P0CI01 402 aa15.56■□□□□ 0.08
GTF2H2-213ENST00000523003 SPDYE2Q495Y8 402 aa15.56■□□□□ 0.08
GTF2H2-213ENST00000523003 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
GTF2H2-213ENST00000523003 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
GTF2H2-213ENST00000523003 ZNF692Q9BU19 519 aaPredicted RBP15.42■□□□□ 0.06
GTF2H2-213ENST00000523003 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
GTF2H2-213ENST00000523003 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
GTF2H2-213ENST00000523003 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
GTF2H2-213ENST00000523003 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
GTF2H2-213ENST00000523003 EVX2Q03828 476 aa15.2■□□□□ 0.02
GTF2H2-213ENST00000523003 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
GTF2H2-213ENST00000523003 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
GTF2H2-213ENST00000523003 HAX1O00165 279 aa15.17■□□□□ 0.02
GTF2H2-213ENST00000523003 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
GTF2H2-213ENST00000523003 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
GTF2H2-213ENST00000523003 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
GTF2H2-213ENST00000523003 CHADLQ6NUI6 762 aa14.89□□□□□ -0.03
GTF2H2-213ENST00000523003 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
GTF2H2-213ENST00000523003 STAG3Q9UJ98 1225 aa14.84□□□□□ -0.03
GTF2H2-213ENST00000523003 PROM2Q8N271 834 aa14.74□□□□□ -0.05
GTF2H2-213ENST00000523003 GABBR2O75899 941 aa14.71□□□□□ -0.05
GTF2H2-213ENST00000523003 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
GTF2H2-213ENST00000523003 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
GTF2H2-213ENST00000523003 FKBP8Q14318 412 aa14.58□□□□□ -0.08
GTF2H2-213ENST00000523003 POTEIP0CG38 1075 aa14.51□□□□□ -0.09
GTF2H2-213ENST00000523003 CD44P16070 742 aaKnown RBP14.51□□□□□ -0.09
GTF2H2-213ENST00000523003 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
GTF2H2-213ENST00000523003 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
GTF2H2-213ENST00000523003 LHX8Q68G74 356 aa14.39□□□□□ -0.11
GTF2H2-213ENST00000523003 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
GTF2H2-213ENST00000523003 MIER1Q8N108 512 aa14.34□□□□□ -0.11
GTF2H2-213ENST00000523003 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
GTF2H2-213ENST00000523003 ZNF579Q8NAF0 562 aaKnown RBP14.3□□□□□ -0.12
GTF2H2-213ENST00000523003 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
GTF2H2-213ENST00000523003 CLCN6P51797 869 aa14.28□□□□□ -0.12
GTF2H2-213ENST00000523003 PLCD3Q8N3E9 789 aa14.25□□□□□ -0.13
GTF2H2-213ENST00000523003 GALR2O43603 387 aaPredicted RBP14.22□□□□□ -0.13
GTF2H2-213ENST00000523003 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
GTF2H2-213ENST00000523003 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
GTF2H2-213ENST00000523003 TSPYL2Q9H2G4 693 aaPredicted RBP14.15□□□□□ -0.14
GTF2H2-213ENST00000523003 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
GTF2H2-213ENST00000523003 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms