RNA–Protein interactions for RNA: ENST00000522942.1

RMDN1-216, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 3

Gene RMDN1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-216ENST00000522942 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
RMDN1-216ENST00000522942 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
RMDN1-216ENST00000522942 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
RMDN1-216ENST00000522942 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
RMDN1-216ENST00000522942 FOXD1Q16676 465 aa21.04■□□□□ 0.96
RMDN1-216ENST00000522942 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
RMDN1-216ENST00000522942 MSH5O43196 834 aa19.83■□□□□ 0.77
RMDN1-216ENST00000522942 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
RMDN1-216ENST00000522942 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
RMDN1-216ENST00000522942 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
RMDN1-216ENST00000522942 ADRA2BP18089 450 aa19.43■□□□□ 0.7
RMDN1-216ENST00000522942 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
RMDN1-216ENST00000522942 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
RMDN1-216ENST00000522942 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
RMDN1-216ENST00000522942 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
RMDN1-216ENST00000522942 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
RMDN1-216ENST00000522942 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
RMDN1-216ENST00000522942 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
RMDN1-216ENST00000522942 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
RMDN1-216ENST00000522942 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
RMDN1-216ENST00000522942 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
RMDN1-216ENST00000522942 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
RMDN1-216ENST00000522942 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
RMDN1-216ENST00000522942 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
RMDN1-216ENST00000522942 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
RMDN1-216ENST00000522942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.2
RMDN1-216ENST00000522942 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
RMDN1-216ENST00000522942 KCNA4P22459 653 aa15.84■□□□□ 0.13
RMDN1-216ENST00000522942 CAPN15O75808 1086 aa15.75■□□□□ 0.11
RMDN1-216ENST00000522942 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
RMDN1-216ENST00000522942 DSG3P32926 999 aa15.73■□□□□ 0.11
RMDN1-216ENST00000522942 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
RMDN1-216ENST00000522942 APLP2Q06481 763 aa15.57■□□□□ 0.08
RMDN1-216ENST00000522942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
RMDN1-216ENST00000522942 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
RMDN1-216ENST00000522942 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
RMDN1-216ENST00000522942 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
RMDN1-216ENST00000522942 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
RMDN1-216ENST00000522942 POTEHQ6S545 545 aa15.36■□□□□ 0.05
RMDN1-216ENST00000522942 ABCB7O75027 752 aa15.33■□□□□ 0.04
RMDN1-216ENST00000522942 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
RMDN1-216ENST00000522942 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
RMDN1-216ENST00000522942 POLA2Q14181 598 aa15.01□□□□□ -0.01
RMDN1-216ENST00000522942 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
RMDN1-216ENST00000522942 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
RMDN1-216ENST00000522942 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
RMDN1-216ENST00000522942 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
RMDN1-216ENST00000522942 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
RMDN1-216ENST00000522942 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
RMDN1-216ENST00000522942 ZBTB22O15209 634 aa14.54□□□□□ -0.08
RMDN1-216ENST00000522942 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
RMDN1-216ENST00000522942 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
RMDN1-216ENST00000522942 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
RMDN1-216ENST00000522942 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
RMDN1-216ENST00000522942 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
RMDN1-216ENST00000522942 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
RMDN1-216ENST00000522942 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
RMDN1-216ENST00000522942 FBLN2P98095 1184 aa14.28□□□□□ -0.12
RMDN1-216ENST00000522942 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
RMDN1-216ENST00000522942 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
RMDN1-216ENST00000522942 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
RMDN1-216ENST00000522942 HAX1O00165 279 aa14.16□□□□□ -0.14
RMDN1-216ENST00000522942 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
RMDN1-216ENST00000522942 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
RMDN1-216ENST00000522942 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
RMDN1-216ENST00000522942 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
RMDN1-216ENST00000522942 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
RMDN1-216ENST00000522942 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
RMDN1-216ENST00000522942 EVX2Q03828 476 aa13.94□□□□□ -0.18
RMDN1-216ENST00000522942 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
RMDN1-216ENST00000522942 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
RMDN1-216ENST00000522942 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
RMDN1-216ENST00000522942 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
RMDN1-216ENST00000522942 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
RMDN1-216ENST00000522942 GABBR2O75899 941 aa13.66□□□□□ -0.22
RMDN1-216ENST00000522942 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
RMDN1-216ENST00000522942 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
RMDN1-216ENST00000522942 CLCN6P51797 869 aa13.49□□□□□ -0.25
RMDN1-216ENST00000522942 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
RMDN1-216ENST00000522942 LHX8Q68G74 356 aa13.43□□□□□ -0.26
RMDN1-216ENST00000522942 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
RMDN1-216ENST00000522942 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
RMDN1-216ENST00000522942 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
RMDN1-216ENST00000522942 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
RMDN1-216ENST00000522942 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
RMDN1-216ENST00000522942 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
RMDN1-216ENST00000522942 DCBLD2Q96PD2 775 aa13.25□□□□□ -0.29
RMDN1-216ENST00000522942 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
RMDN1-216ENST00000522942 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
RMDN1-216ENST00000522942 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
RMDN1-216ENST00000522942 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
RMDN1-216ENST00000522942 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
RMDN1-216ENST00000522942 PROM2Q8N271 834 aa13.02□□□□□ -0.33
RMDN1-216ENST00000522942 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
RMDN1-216ENST00000522942 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
RMDN1-216ENST00000522942 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
RMDN1-216ENST00000522942 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
RMDN1-216ENST00000522942 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
RMDN1-216ENST00000522942 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
RMDN1-216ENST00000522942 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms