RNA–Protein interactions for RNA: ENST00000522578.1

KHDRBS3-210, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

TSL 2

Gene KHDRBS3, Length 734 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-210ENST00000522578 AEBP2Q6ZN18 517 aaPredicted RBP39.26■■■■□ 3.88
KHDRBS3-210ENST00000522578 CHIC1Q5VXU3 224 aa37.1■■■■□ 3.53
KHDRBS3-210ENST00000522578 SENP3Q9H4L4 574 aaPredicted RBP33.54■■■□□ 2.96
KHDRBS3-210ENST00000522578 PHF23Q9BUL5 403 aaPredicted RBP33.05■■■□□ 2.88
KHDRBS3-210ENST00000522578 FOXD1Q16676 465 aa31.27■■■□□ 2.6
KHDRBS3-210ENST00000522578 PLPPR3Q6T4P5 718 aa29.54■■■□□ 2.32
KHDRBS3-210ENST00000522578 MSH5O43196 834 aa29.36■■■□□ 2.29
KHDRBS3-210ENST00000522578 PIAS4Q8N2W9 510 aaPredicted RBP29.15■■■□□ 2.26
KHDRBS3-210ENST00000522578 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
KHDRBS3-210ENST00000522578 POTEDQ86YR6 584 aa28.99■■■□□ 2.23
KHDRBS3-210ENST00000522578 ADRA2BP18089 450 aa28.94■■■□□ 2.22
KHDRBS3-210ENST00000522578 MAPK8IP2Q13387 824 aaPredicted RBP26.64■■□□□ 1.86
KHDRBS3-210ENST00000522578 DMRT2Q9Y5R5 561 aa26.57■■□□□ 1.84
KHDRBS3-210ENST00000522578 SCAF1Q9H7N4 1312 aaKnown RBP26.51■■□□□ 1.83
KHDRBS3-210ENST00000522578 PPP4R3CPQ6ZMV5 832 aa25.85■■□□□ 1.73
KHDRBS3-210ENST00000522578 HOXD11P31277 338 aaPredicted RBP25.52■■□□□ 1.68
KHDRBS3-210ENST00000522578 CNKSR2Q8WXI2 1034 aa25.43■■□□□ 1.66
KHDRBS3-210ENST00000522578 DCAF8L1A6NGE4 600 aa25.41■■□□□ 1.66
KHDRBS3-210ENST00000522578 CACNB1Q02641 598 aaPredicted RBP25.27■■□□□ 1.64
KHDRBS3-210ENST00000522578 RNF216Q9NWF9 866 aaPredicted RBP25.26■■□□□ 1.63
KHDRBS3-210ENST00000522578 RNF39Q9H2S5 420 aa25.04■■□□□ 1.6
KHDRBS3-210ENST00000522578 NCBP3Q53F19 620 aaKnown RBP24.8■■□□□ 1.56
KHDRBS3-210ENST00000522578 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
KHDRBS3-210ENST00000522578 C1QBPQ07021 282 aaKnown RBP24.66■■□□□ 1.54
KHDRBS3-210ENST00000522578 NPM3O75607 178 aaKnown RBP24.45■■□□□ 1.5
KHDRBS3-210ENST00000522578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.26■■□□□ 1.47
KHDRBS3-210ENST00000522578 KCNA4P22459 653 aa23.78■■□□□ 1.4
KHDRBS3-210ENST00000522578 U3KPZ7 1027 aaPredicted RBP23.76■■□□□ 1.39
KHDRBS3-210ENST00000522578 SPINK5Q9NQ38 1064 aaPredicted RBP23.45■■□□□ 1.34
KHDRBS3-210ENST00000522578 CAPN15O75808 1086 aa23.41■■□□□ 1.34
KHDRBS3-210ENST00000522578 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
KHDRBS3-210ENST00000522578 DSG3P32926 999 aa23.36■■□□□ 1.33
KHDRBS3-210ENST00000522578 APLP2Q06481 763 aa23.08■■□□□ 1.29
KHDRBS3-210ENST00000522578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
KHDRBS3-210ENST00000522578 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
KHDRBS3-210ENST00000522578 ZNF219Q9P2Y4 722 aaPredicted RBP22.98■■□□□ 1.27
KHDRBS3-210ENST00000522578 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
KHDRBS3-210ENST00000522578 SAMD1Q6SPF0 538 aaPredicted RBP22.88■■□□□ 1.25
KHDRBS3-210ENST00000522578 ABCB7O75027 752 aa22.85■■□□□ 1.25
KHDRBS3-210ENST00000522578 POTEHQ6S545 545 aa22.68■■□□□ 1.22
KHDRBS3-210ENST00000522578 MYCNP04198 464 aaPredicted RBP22.62■■□□□ 1.21
KHDRBS3-210ENST00000522578 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
KHDRBS3-210ENST00000522578 POLA2Q14181 598 aa22.33■■□□□ 1.17
KHDRBS3-210ENST00000522578 RBM42Q9BTD8 480 aaKnown RBP22.3■■□□□ 1.16
KHDRBS3-210ENST00000522578 FOXD4L1Q9NU39 408 aa22.27■■□□□ 1.16
KHDRBS3-210ENST00000522578 ATF5Q9Y2D1 282 aaPredicted RBP22.1■■□□□ 1.13
KHDRBS3-210ENST00000522578 ZBTB12Q9Y330 459 aaPredicted RBP21.91■■□□□ 1.1
KHDRBS3-210ENST00000522578 CHRDL2Q6WN34 429 aa21.89■■□□□ 1.09
KHDRBS3-210ENST00000522578 ZBTB22O15209 634 aa21.88■■□□□ 1.09
KHDRBS3-210ENST00000522578 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
KHDRBS3-210ENST00000522578 ATXN8OSP0DMR3 200 aa21.64■■□□□ 1.05
KHDRBS3-210ENST00000522578 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
KHDRBS3-210ENST00000522578 REM2Q8IYK8 340 aaPredicted RBP21.53■■□□□ 1.04
KHDRBS3-210ENST00000522578 PIP4P2Q8N4L2 257 aa21.33■■□□□ 1.01
KHDRBS3-210ENST00000522578 PITPNM1O00562 1244 aa21.31■■□□□ 1
KHDRBS3-210ENST00000522578 FBLN2P98095 1184 aa21.25■□□□□ 0.99
KHDRBS3-210ENST00000522578 SPDYE2BA6NHP3 402 aa21.21■□□□□ 0.99
KHDRBS3-210ENST00000522578 SPDYE6P0CI01 402 aa21.21■□□□□ 0.99
KHDRBS3-210ENST00000522578 SPDYE2Q495Y8 402 aa21.21■□□□□ 0.99
KHDRBS3-210ENST00000522578 FXR2P51116 673 aaKnown RBP eCLIP21.19■□□□□ 0.98
KHDRBS3-210ENST00000522578 SP7Q8TDD2 431 aaPredicted RBP21.17■□□□□ 0.98
KHDRBS3-210ENST00000522578 MKRN4PQ13434 485 aaPredicted RBP21.09■□□□□ 0.97
KHDRBS3-210ENST00000522578 HAX1O00165 279 aa20.95■□□□□ 0.94
KHDRBS3-210ENST00000522578 SSUH2Q9Y2M2 353 aa20.92■□□□□ 0.94
KHDRBS3-210ENST00000522578 ZNF692Q9BU19 519 aaPredicted RBP20.89■□□□□ 0.93
KHDRBS3-210ENST00000522578 SPDYE1Q8NFV5 336 aaPredicted RBP20.88■□□□□ 0.93
KHDRBS3-210ENST00000522578 CLEC11AQ9Y240 323 aa20.8■□□□□ 0.92
KHDRBS3-210ENST00000522578 PRKAR2AP13861 404 aaKnown RBP20.74■□□□□ 0.91
KHDRBS3-210ENST00000522578 EVX2Q03828 476 aa20.7■□□□□ 0.9
KHDRBS3-210ENST00000522578 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
KHDRBS3-210ENST00000522578 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
KHDRBS3-210ENST00000522578 C19orf67A6NJJ6 358 aa20.51■□□□□ 0.87
KHDRBS3-210ENST00000522578 PRR29P0C7W0 189 aa20.45■□□□□ 0.86
KHDRBS3-210ENST00000522578 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
KHDRBS3-210ENST00000522578 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
KHDRBS3-210ENST00000522578 GABBR2O75899 941 aa20.23■□□□□ 0.83
KHDRBS3-210ENST00000522578 FARP1Q9Y4F1 1045 aaPredicted RBP20.15■□□□□ 0.82
KHDRBS3-210ENST00000522578 CD44P16070 742 aaKnown RBP20.07■□□□□ 0.8
KHDRBS3-210ENST00000522578 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
KHDRBS3-210ENST00000522578 SPDYE4A6NLX3 237 aa19.97■□□□□ 0.79
KHDRBS3-210ENST00000522578 CREBZFQ9NS37 354 aa19.93■□□□□ 0.78
KHDRBS3-210ENST00000522578 CLCN6P51797 869 aa19.89■□□□□ 0.77
KHDRBS3-210ENST00000522578 LHX8Q68G74 356 aa19.83■□□□□ 0.77
KHDRBS3-210ENST00000522578 POTEIP0CG38 1075 aa19.81■□□□□ 0.76
KHDRBS3-210ENST00000522578 ZNF579Q8NAF0 562 aaKnown RBP19.79■□□□□ 0.76
KHDRBS3-210ENST00000522578 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
KHDRBS3-210ENST00000522578 DCBLD2Q96PD2 775 aa19.62■□□□□ 0.73
KHDRBS3-210ENST00000522578 MNX1P50219 401 aaPredicted RBP19.58■□□□□ 0.72
KHDRBS3-210ENST00000522578 PAK3O75914 559 aaPredicted RBP19.54■□□□□ 0.72
KHDRBS3-210ENST00000522578 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
KHDRBS3-210ENST00000522578 PROM2Q8N271 834 aa19.53■□□□□ 0.72
KHDRBS3-210ENST00000522578 GALR2O43603 387 aaPredicted RBP19.52■□□□□ 0.72
KHDRBS3-210ENST00000522578 PHF12Q96QT6 1004 aa19.45■□□□□ 0.7
KHDRBS3-210ENST00000522578 MS4A3Q96HJ5 214 aa19.2■□□□□ 0.66
KHDRBS3-210ENST00000522578 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
KHDRBS3-210ENST00000522578 POTEB2H3BUK9 544 aa19.15■□□□□ 0.66
KHDRBS3-210ENST00000522578 TSPYL2Q9H2G4 693 aaPredicted RBP19.15■□□□□ 0.66
KHDRBS3-210ENST00000522578 ASTLQ6HA08 431 aaPredicted RBP19.14■□□□□ 0.65
KHDRBS3-210ENST00000522578 CCDC61Q9Y6R9 512 aa19.13■□□□□ 0.65
KHDRBS3-210ENST00000522578 OTUD5Q96G74 571 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms