RNA–Protein interactions for RNA: ENST00000522326.1

EFCAB13-210, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 4

Gene EFCAB13, Length 541 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-210ENST00000522326 AEBP2Q6ZN18 517 aaPredicted RBP31.99■■■□□ 2.71
EFCAB13-210ENST00000522326 CHIC1Q5VXU3 224 aa30.93■■■□□ 2.54
EFCAB13-210ENST00000522326 SENP3Q9H4L4 574 aaPredicted RBP27.41■■□□□ 1.98
EFCAB13-210ENST00000522326 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
EFCAB13-210ENST00000522326 FOXD1Q16676 465 aa25.35■■□□□ 1.65
EFCAB13-210ENST00000522326 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
EFCAB13-210ENST00000522326 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
EFCAB13-210ENST00000522326 ADRA2BP18089 450 aa23.95■■□□□ 1.42
EFCAB13-210ENST00000522326 PIAS4Q8N2W9 510 aaPredicted RBP23.86■■□□□ 1.41
EFCAB13-210ENST00000522326 MSH5O43196 834 aa23.72■■□□□ 1.39
EFCAB13-210ENST00000522326 POTEDQ86YR6 584 aa22.24■■□□□ 1.15
EFCAB13-210ENST00000522326 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
EFCAB13-210ENST00000522326 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
EFCAB13-210ENST00000522326 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
EFCAB13-210ENST00000522326 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
EFCAB13-210ENST00000522326 CNKSR2Q8WXI2 1034 aa21.43■■□□□ 1.02
EFCAB13-210ENST00000522326 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
EFCAB13-210ENST00000522326 HOXD11P31277 338 aaPredicted RBP21.14■□□□□ 0.97
EFCAB13-210ENST00000522326 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
EFCAB13-210ENST00000522326 NPM3O75607 178 aaKnown RBP20.84■□□□□ 0.93
EFCAB13-210ENST00000522326 KCNA4P22459 653 aa20.81■□□□□ 0.92
EFCAB13-210ENST00000522326 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
EFCAB13-210ENST00000522326 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
EFCAB13-210ENST00000522326 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
EFCAB13-210ENST00000522326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
EFCAB13-210ENST00000522326 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
EFCAB13-210ENST00000522326 CACNB1Q02641 598 aaPredicted RBP19.99■□□□□ 0.79
EFCAB13-210ENST00000522326 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
EFCAB13-210ENST00000522326 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
EFCAB13-210ENST00000522326 U3KPZ7 1027 aaPredicted RBP19.72■□□□□ 0.75
EFCAB13-210ENST00000522326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
EFCAB13-210ENST00000522326 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
EFCAB13-210ENST00000522326 APLP2Q06481 763 aa19.44■□□□□ 0.7
EFCAB13-210ENST00000522326 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
EFCAB13-210ENST00000522326 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
EFCAB13-210ENST00000522326 SAMD1Q6SPF0 538 aaPredicted RBP19.37■□□□□ 0.69
EFCAB13-210ENST00000522326 CAPN15O75808 1086 aa19.26■□□□□ 0.67
EFCAB13-210ENST00000522326 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
EFCAB13-210ENST00000522326 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
EFCAB13-210ENST00000522326 ZBTB22O15209 634 aa19.1■□□□□ 0.65
EFCAB13-210ENST00000522326 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
EFCAB13-210ENST00000522326 DSG3P32926 999 aa19.03■□□□□ 0.64
EFCAB13-210ENST00000522326 ATXN8OSP0DMR3 200 aa18.82■□□□□ 0.6
EFCAB13-210ENST00000522326 ABCB7O75027 752 aa18.79■□□□□ 0.6
EFCAB13-210ENST00000522326 ATF5Q9Y2D1 282 aaPredicted RBP18.7■□□□□ 0.58
EFCAB13-210ENST00000522326 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
EFCAB13-210ENST00000522326 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
EFCAB13-210ENST00000522326 POLA2Q14181 598 aa18.63■□□□□ 0.57
EFCAB13-210ENST00000522326 ZBTB12Q9Y330 459 aaPredicted RBP18.48■□□□□ 0.55
EFCAB13-210ENST00000522326 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
EFCAB13-210ENST00000522326 FBLN2P98095 1184 aa18.15■□□□□ 0.5
EFCAB13-210ENST00000522326 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
EFCAB13-210ENST00000522326 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
EFCAB13-210ENST00000522326 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
EFCAB13-210ENST00000522326 SPDYE2BA6NHP3 402 aa17.88■□□□□ 0.45
EFCAB13-210ENST00000522326 SPDYE6P0CI01 402 aa17.88■□□□□ 0.45
EFCAB13-210ENST00000522326 SPDYE2Q495Y8 402 aa17.88■□□□□ 0.45
EFCAB13-210ENST00000522326 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
EFCAB13-210ENST00000522326 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
EFCAB13-210ENST00000522326 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
EFCAB13-210ENST00000522326 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
EFCAB13-210ENST00000522326 POTEHQ6S545 545 aa17.56■□□□□ 0.4
EFCAB13-210ENST00000522326 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
EFCAB13-210ENST00000522326 SPDYE1Q8NFV5 336 aaPredicted RBP17.45■□□□□ 0.38
EFCAB13-210ENST00000522326 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
EFCAB13-210ENST00000522326 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
EFCAB13-210ENST00000522326 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
EFCAB13-210ENST00000522326 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
EFCAB13-210ENST00000522326 FXR2P51116 673 aaKnown RBP eCLIP17.25■□□□□ 0.35
EFCAB13-210ENST00000522326 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
EFCAB13-210ENST00000522326 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
EFCAB13-210ENST00000522326 PROM2Q8N271 834 aa17.05■□□□□ 0.32
EFCAB13-210ENST00000522326 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
EFCAB13-210ENST00000522326 FKBP8Q14318 412 aa16.92■□□□□ 0.3
EFCAB13-210ENST00000522326 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
EFCAB13-210ENST00000522326 HAX1O00165 279 aa16.83■□□□□ 0.28
EFCAB13-210ENST00000522326 CREBZFQ9NS37 354 aa16.75■□□□□ 0.27
EFCAB13-210ENST00000522326 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
EFCAB13-210ENST00000522326 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
EFCAB13-210ENST00000522326 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
EFCAB13-210ENST00000522326 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
EFCAB13-210ENST00000522326 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
EFCAB13-210ENST00000522326 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
EFCAB13-210ENST00000522326 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
EFCAB13-210ENST00000522326 MNX1P50219 401 aaPredicted RBP16.52■□□□□ 0.24
EFCAB13-210ENST00000522326 EVX2Q03828 476 aa16.52■□□□□ 0.24
EFCAB13-210ENST00000522326 MIER1Q8N108 512 aa16.51■□□□□ 0.23
EFCAB13-210ENST00000522326 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
EFCAB13-210ENST00000522326 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
EFCAB13-210ENST00000522326 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
EFCAB13-210ENST00000522326 CLCN6P51797 869 aa16.42■□□□□ 0.22
EFCAB13-210ENST00000522326 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
EFCAB13-210ENST00000522326 ZNF579Q8NAF0 562 aaKnown RBP16.34■□□□□ 0.21
EFCAB13-210ENST00000522326 GABBR2O75899 941 aa16.29■□□□□ 0.2
EFCAB13-210ENST00000522326 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
EFCAB13-210ENST00000522326 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
EFCAB13-210ENST00000522326 RASEFQ8IZ41 740 aa16.13■□□□□ 0.17
EFCAB13-210ENST00000522326 NUBP1P53384 320 aa16.12■□□□□ 0.17
EFCAB13-210ENST00000522326 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
EFCAB13-210ENST00000522326 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms