RNA–Protein interactions for RNA: ENST00000522254.5

EFCAB1-207, Transcript of EF-hand calcium binding domain 1, humanhuman

TSL 3

Gene EFCAB1, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB1-207ENST00000522254 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
EFCAB1-207ENST00000522254 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
EFCAB1-207ENST00000522254 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
EFCAB1-207ENST00000522254 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
EFCAB1-207ENST00000522254 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
EFCAB1-207ENST00000522254 FOXD1Q16676 465 aa18.82■□□□□ 0.6
EFCAB1-207ENST00000522254 ADRA2BP18089 450 aa18.44■□□□□ 0.54
EFCAB1-207ENST00000522254 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
EFCAB1-207ENST00000522254 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
EFCAB1-207ENST00000522254 KCNA4P22459 653 aa17.25■□□□□ 0.35
EFCAB1-207ENST00000522254 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
EFCAB1-207ENST00000522254 MSH5O43196 834 aa17.15■□□□□ 0.34
EFCAB1-207ENST00000522254 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
EFCAB1-207ENST00000522254 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
EFCAB1-207ENST00000522254 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
EFCAB1-207ENST00000522254 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
EFCAB1-207ENST00000522254 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
EFCAB1-207ENST00000522254 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
EFCAB1-207ENST00000522254 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
EFCAB1-207ENST00000522254 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
EFCAB1-207ENST00000522254 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
EFCAB1-207ENST00000522254 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
EFCAB1-207ENST00000522254 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
EFCAB1-207ENST00000522254 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
EFCAB1-207ENST00000522254 ZBTB22O15209 634 aa15.89■□□□□ 0.13
EFCAB1-207ENST00000522254 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
EFCAB1-207ENST00000522254 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
EFCAB1-207ENST00000522254 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
EFCAB1-207ENST00000522254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
EFCAB1-207ENST00000522254 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
EFCAB1-207ENST00000522254 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
EFCAB1-207ENST00000522254 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
EFCAB1-207ENST00000522254 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
EFCAB1-207ENST00000522254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
EFCAB1-207ENST00000522254 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
EFCAB1-207ENST00000522254 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
EFCAB1-207ENST00000522254 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
EFCAB1-207ENST00000522254 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
EFCAB1-207ENST00000522254 APLP2Q06481 763 aa14.73□□□□□ -0.05
EFCAB1-207ENST00000522254 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
EFCAB1-207ENST00000522254 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
EFCAB1-207ENST00000522254 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
EFCAB1-207ENST00000522254 CAPN15O75808 1086 aa14.57□□□□□ -0.08
EFCAB1-207ENST00000522254 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
EFCAB1-207ENST00000522254 FKBP8Q14318 412 aa14.54□□□□□ -0.08
EFCAB1-207ENST00000522254 POLA2Q14181 598 aa14.4□□□□□ -0.1
EFCAB1-207ENST00000522254 ABCB7O75027 752 aa14.36□□□□□ -0.11
EFCAB1-207ENST00000522254 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
EFCAB1-207ENST00000522254 FBLN2P98095 1184 aa14.26□□□□□ -0.13
EFCAB1-207ENST00000522254 DSG3P32926 999 aa14.18□□□□□ -0.14
EFCAB1-207ENST00000522254 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
EFCAB1-207ENST00000522254 SPDYE4A6NLX3 237 aa14.15□□□□□ -0.14
EFCAB1-207ENST00000522254 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
EFCAB1-207ENST00000522254 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
EFCAB1-207ENST00000522254 PROM2Q8N271 834 aa13.89□□□□□ -0.19
EFCAB1-207ENST00000522254 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
EFCAB1-207ENST00000522254 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
EFCAB1-207ENST00000522254 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
EFCAB1-207ENST00000522254 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
EFCAB1-207ENST00000522254 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
EFCAB1-207ENST00000522254 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
EFCAB1-207ENST00000522254 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
EFCAB1-207ENST00000522254 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
EFCAB1-207ENST00000522254 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
EFCAB1-207ENST00000522254 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
EFCAB1-207ENST00000522254 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
EFCAB1-207ENST00000522254 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
EFCAB1-207ENST00000522254 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
EFCAB1-207ENST00000522254 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
EFCAB1-207ENST00000522254 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
EFCAB1-207ENST00000522254 MIER1Q8N108 512 aa13.4□□□□□ -0.26
EFCAB1-207ENST00000522254 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
EFCAB1-207ENST00000522254 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
EFCAB1-207ENST00000522254 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
EFCAB1-207ENST00000522254 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
EFCAB1-207ENST00000522254 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
EFCAB1-207ENST00000522254 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
EFCAB1-207ENST00000522254 PKD2Q13563 968 aa13.21□□□□□ -0.29
EFCAB1-207ENST00000522254 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
EFCAB1-207ENST00000522254 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
EFCAB1-207ENST00000522254 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
EFCAB1-207ENST00000522254 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
EFCAB1-207ENST00000522254 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
EFCAB1-207ENST00000522254 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
EFCAB1-207ENST00000522254 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
EFCAB1-207ENST00000522254 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
EFCAB1-207ENST00000522254 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
EFCAB1-207ENST00000522254 NUBP1P53384 320 aa12.98□□□□□ -0.33
EFCAB1-207ENST00000522254 RGL2O15211 777 aa12.96□□□□□ -0.33
EFCAB1-207ENST00000522254 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
EFCAB1-207ENST00000522254 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
EFCAB1-207ENST00000522254 GSE1Q14687 1217 aa12.9□□□□□ -0.34
EFCAB1-207ENST00000522254 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
EFCAB1-207ENST00000522254 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
EFCAB1-207ENST00000522254 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
EFCAB1-207ENST00000522254 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
EFCAB1-207ENST00000522254 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
EFCAB1-207ENST00000522254 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
EFCAB1-207ENST00000522254 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
EFCAB1-207ENST00000522254 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms