RNA–Protein interactions for RNA: ENST00000522253.1

PHF20L1-218, Transcript of PHD finger protein 20 like 1, humanhuman

TSL 2

Gene PHF20L1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20L1-218ENST00000522253 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
PHF20L1-218ENST00000522253 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
PHF20L1-218ENST00000522253 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.17
PHF20L1-218ENST00000522253 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
PHF20L1-218ENST00000522253 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
PHF20L1-218ENST00000522253 FOXD1Q16676 465 aa20.22■□□□□ 0.83
PHF20L1-218ENST00000522253 ADRA2BP18089 450 aa19.69■□□□□ 0.74
PHF20L1-218ENST00000522253 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
PHF20L1-218ENST00000522253 PIAS4Q8N2W9 510 aaPredicted RBP19.14■□□□□ 0.65
PHF20L1-218ENST00000522253 MSH5O43196 834 aa18.53■□□□□ 0.56
PHF20L1-218ENST00000522253 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
PHF20L1-218ENST00000522253 KCNA4P22459 653 aa18.24■□□□□ 0.51
PHF20L1-218ENST00000522253 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
PHF20L1-218ENST00000522253 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
PHF20L1-218ENST00000522253 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
PHF20L1-218ENST00000522253 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
PHF20L1-218ENST00000522253 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
PHF20L1-218ENST00000522253 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
PHF20L1-218ENST00000522253 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
PHF20L1-218ENST00000522253 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
PHF20L1-218ENST00000522253 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
PHF20L1-218ENST00000522253 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
PHF20L1-218ENST00000522253 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
PHF20L1-218ENST00000522253 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
PHF20L1-218ENST00000522253 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
PHF20L1-218ENST00000522253 ZBTB22O15209 634 aa16.77■□□□□ 0.28
PHF20L1-218ENST00000522253 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
PHF20L1-218ENST00000522253 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
PHF20L1-218ENST00000522253 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
PHF20L1-218ENST00000522253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
PHF20L1-218ENST00000522253 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
PHF20L1-218ENST00000522253 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
PHF20L1-218ENST00000522253 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
PHF20L1-218ENST00000522253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
PHF20L1-218ENST00000522253 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
PHF20L1-218ENST00000522253 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
PHF20L1-218ENST00000522253 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
PHF20L1-218ENST00000522253 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
PHF20L1-218ENST00000522253 APLP2Q06481 763 aa15.83■□□□□ 0.12
PHF20L1-218ENST00000522253 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
PHF20L1-218ENST00000522253 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
PHF20L1-218ENST00000522253 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
PHF20L1-218ENST00000522253 CAPN15O75808 1086 aa15.58■□□□□ 0.08
PHF20L1-218ENST00000522253 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
PHF20L1-218ENST00000522253 POLA2Q14181 598 aa15.38■□□□□ 0.05
PHF20L1-218ENST00000522253 ABCB7O75027 752 aa15.31■□□□□ 0.04
PHF20L1-218ENST00000522253 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
PHF20L1-218ENST00000522253 FKBP8Q14318 412 aa15.28■□□□□ 0.04
PHF20L1-218ENST00000522253 DSG3P32926 999 aa15.23■□□□□ 0.03
PHF20L1-218ENST00000522253 FBLN2P98095 1184 aa15.2■□□□□ 0.02
PHF20L1-218ENST00000522253 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
PHF20L1-218ENST00000522253 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
PHF20L1-218ENST00000522253 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
PHF20L1-218ENST00000522253 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
PHF20L1-218ENST00000522253 PROM2Q8N271 834 aa14.76□□□□□ -0.05
PHF20L1-218ENST00000522253 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
PHF20L1-218ENST00000522253 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
PHF20L1-218ENST00000522253 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
PHF20L1-218ENST00000522253 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
PHF20L1-218ENST00000522253 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
PHF20L1-218ENST00000522253 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
PHF20L1-218ENST00000522253 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
PHF20L1-218ENST00000522253 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
PHF20L1-218ENST00000522253 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
PHF20L1-218ENST00000522253 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
PHF20L1-218ENST00000522253 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
PHF20L1-218ENST00000522253 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
PHF20L1-218ENST00000522253 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
PHF20L1-218ENST00000522253 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
PHF20L1-218ENST00000522253 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
PHF20L1-218ENST00000522253 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
PHF20L1-218ENST00000522253 MIER1Q8N108 512 aa14.22□□□□□ -0.13
PHF20L1-218ENST00000522253 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
PHF20L1-218ENST00000522253 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
PHF20L1-218ENST00000522253 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
PHF20L1-218ENST00000522253 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
PHF20L1-218ENST00000522253 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
PHF20L1-218ENST00000522253 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
PHF20L1-218ENST00000522253 SPOCK2Q92563 424 aa14.06□□□□□ -0.16
PHF20L1-218ENST00000522253 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
PHF20L1-218ENST00000522253 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
PHF20L1-218ENST00000522253 PKD2Q13563 968 aa13.9□□□□□ -0.18
PHF20L1-218ENST00000522253 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
PHF20L1-218ENST00000522253 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
PHF20L1-218ENST00000522253 NUBP1P53384 320 aa13.8□□□□□ -0.2
PHF20L1-218ENST00000522253 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
PHF20L1-218ENST00000522253 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
PHF20L1-218ENST00000522253 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
PHF20L1-218ENST00000522253 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
PHF20L1-218ENST00000522253 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
PHF20L1-218ENST00000522253 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
PHF20L1-218ENST00000522253 GSE1Q14687 1217 aa13.73□□□□□ -0.21
PHF20L1-218ENST00000522253 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
PHF20L1-218ENST00000522253 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
PHF20L1-218ENST00000522253 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
PHF20L1-218ENST00000522253 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
PHF20L1-218ENST00000522253 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
PHF20L1-218ENST00000522253 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
PHF20L1-218ENST00000522253 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
PHF20L1-218ENST00000522253 RGL2O15211 777 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms