RNA–Protein interactions for RNA: ENST00000522088.1

EIF3E-213, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 3

Gene EIF3E, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-213ENST00000522088 AEBP2Q6ZN18 517 aaPredicted RBP32.36■■■□□ 2.77
EIF3E-213ENST00000522088 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
EIF3E-213ENST00000522088 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
EIF3E-213ENST00000522088 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
EIF3E-213ENST00000522088 FOXD1Q16676 465 aa25.75■■□□□ 1.71
EIF3E-213ENST00000522088 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
EIF3E-213ENST00000522088 PIAS4Q8N2W9 510 aaPredicted RBP24.14■■□□□ 1.45
EIF3E-213ENST00000522088 MSH5O43196 834 aa24.13■■□□□ 1.45
EIF3E-213ENST00000522088 PPP6R1Q9UPN7 881 aa24.04■■□□□ 1.44
EIF3E-213ENST00000522088 ADRA2BP18089 450 aa24.01■■□□□ 1.43
EIF3E-213ENST00000522088 POTEDQ86YR6 584 aa23.61■■□□□ 1.37
EIF3E-213ENST00000522088 MAPK8IP2Q13387 824 aaPredicted RBP22.05■■□□□ 1.12
EIF3E-213ENST00000522088 SCAF1Q9H7N4 1312 aaKnown RBP21.95■■□□□ 1.1
EIF3E-213ENST00000522088 DMRT2Q9Y5R5 561 aa21.88■■□□□ 1.09
EIF3E-213ENST00000522088 PPP4R3CPQ6ZMV5 832 aa21.51■■□□□ 1.03
EIF3E-213ENST00000522088 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
EIF3E-213ENST00000522088 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
EIF3E-213ENST00000522088 HOXD11P31277 338 aaPredicted RBP21.03■□□□□ 0.96
EIF3E-213ENST00000522088 RNF216Q9NWF9 866 aaPredicted RBP20.9■□□□□ 0.94
EIF3E-213ENST00000522088 CACNB1Q02641 598 aaPredicted RBP20.79■□□□□ 0.92
EIF3E-213ENST00000522088 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
EIF3E-213ENST00000522088 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
EIF3E-213ENST00000522088 NPM3O75607 178 aaKnown RBP20.38■□□□□ 0.85
EIF3E-213ENST00000522088 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
EIF3E-213ENST00000522088 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
EIF3E-213ENST00000522088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.82
EIF3E-213ENST00000522088 KCNA4P22459 653 aa19.98■□□□□ 0.79
EIF3E-213ENST00000522088 U3KPZ7 1027 aaPredicted RBP19.68■□□□□ 0.74
EIF3E-213ENST00000522088 CAPN15O75808 1086 aa19.47■□□□□ 0.71
EIF3E-213ENST00000522088 SPINK5Q9NQ38 1064 aaPredicted RBP19.44■□□□□ 0.7
EIF3E-213ENST00000522088 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
EIF3E-213ENST00000522088 DSG3P32926 999 aa19.26■□□□□ 0.67
EIF3E-213ENST00000522088 APLP2Q06481 763 aa19.16■□□□□ 0.66
EIF3E-213ENST00000522088 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
EIF3E-213ENST00000522088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
EIF3E-213ENST00000522088 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
EIF3E-213ENST00000522088 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
EIF3E-213ENST00000522088 ABCB7O75027 752 aa19.03■□□□□ 0.64
EIF3E-213ENST00000522088 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
EIF3E-213ENST00000522088 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
EIF3E-213ENST00000522088 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
EIF3E-213ENST00000522088 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
EIF3E-213ENST00000522088 POLA2Q14181 598 aa18.56■□□□□ 0.56
EIF3E-213ENST00000522088 POTEHQ6S545 545 aa18.52■□□□□ 0.56
EIF3E-213ENST00000522088 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
EIF3E-213ENST00000522088 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
EIF3E-213ENST00000522088 ZBTB22O15209 634 aa18.34■□□□□ 0.53
EIF3E-213ENST00000522088 ZBTB12Q9Y330 459 aaPredicted RBP18.17■□□□□ 0.5
EIF3E-213ENST00000522088 CHRDL2Q6WN34 429 aa18.02■□□□□ 0.48
EIF3E-213ENST00000522088 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
EIF3E-213ENST00000522088 ATXN8OSP0DMR3 200 aa18■□□□□ 0.47
EIF3E-213ENST00000522088 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
EIF3E-213ENST00000522088 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
EIF3E-213ENST00000522088 FBLN2P98095 1184 aa17.76■□□□□ 0.43
EIF3E-213ENST00000522088 PITPNM1O00562 1244 aa17.63■□□□□ 0.41
EIF3E-213ENST00000522088 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
EIF3E-213ENST00000522088 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
EIF3E-213ENST00000522088 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
EIF3E-213ENST00000522088 PIP4P2Q8N4L2 257 aa17.57■□□□□ 0.4
EIF3E-213ENST00000522088 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
EIF3E-213ENST00000522088 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
EIF3E-213ENST00000522088 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
EIF3E-213ENST00000522088 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
EIF3E-213ENST00000522088 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
EIF3E-213ENST00000522088 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
EIF3E-213ENST00000522088 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
EIF3E-213ENST00000522088 HAX1O00165 279 aa17.33■□□□□ 0.36
EIF3E-213ENST00000522088 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.36
EIF3E-213ENST00000522088 SPDYE1Q8NFV5 336 aaPredicted RBP17.32■□□□□ 0.36
EIF3E-213ENST00000522088 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
EIF3E-213ENST00000522088 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
EIF3E-213ENST00000522088 PRR29P0C7W0 189 aa17.04■□□□□ 0.32
EIF3E-213ENST00000522088 EVX2Q03828 476 aa17.03■□□□□ 0.32
EIF3E-213ENST00000522088 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
EIF3E-213ENST00000522088 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
EIF3E-213ENST00000522088 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
EIF3E-213ENST00000522088 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
EIF3E-213ENST00000522088 GABBR2O75899 941 aa16.66■□□□□ 0.26
EIF3E-213ENST00000522088 CD44P16070 742 aaKnown RBP16.66■□□□□ 0.26
EIF3E-213ENST00000522088 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
EIF3E-213ENST00000522088 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
EIF3E-213ENST00000522088 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
EIF3E-213ENST00000522088 ZNF579Q8NAF0 562 aaKnown RBP16.34■□□□□ 0.21
EIF3E-213ENST00000522088 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
EIF3E-213ENST00000522088 CLCN6P51797 869 aa16.31■□□□□ 0.2
EIF3E-213ENST00000522088 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
EIF3E-213ENST00000522088 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
EIF3E-213ENST00000522088 DCBLD2Q96PD2 775 aa16.28■□□□□ 0.2
EIF3E-213ENST00000522088 LHX8Q68G74 356 aa16.27■□□□□ 0.2
EIF3E-213ENST00000522088 PROM2Q8N271 834 aa16.22■□□□□ 0.19
EIF3E-213ENST00000522088 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
EIF3E-213ENST00000522088 PHF12Q96QT6 1004 aa16.2■□□□□ 0.18
EIF3E-213ENST00000522088 GALR2O43603 387 aaPredicted RBP16.19■□□□□ 0.18
EIF3E-213ENST00000522088 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
EIF3E-213ENST00000522088 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
EIF3E-213ENST00000522088 MIER1Q8N108 512 aa16.02■□□□□ 0.16
EIF3E-213ENST00000522088 MS4A3Q96HJ5 214 aa15.97■□□□□ 0.15
EIF3E-213ENST00000522088 FKBP8Q14318 412 aa15.94■□□□□ 0.14
EIF3E-213ENST00000522088 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
EIF3E-213ENST00000522088 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms