RNA–Protein interactions for RNA: ENST00000521976.1

VPS37A-211, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-211ENST00000521976 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
VPS37A-211ENST00000521976 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
VPS37A-211ENST00000521976 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
VPS37A-211ENST00000521976 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
VPS37A-211ENST00000521976 FOXD1Q16676 465 aa22.97■■□□□ 1.27
VPS37A-211ENST00000521976 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
VPS37A-211ENST00000521976 MSH5O43196 834 aa21.53■■□□□ 1.04
VPS37A-211ENST00000521976 PIAS4Q8N2W9 510 aaPredicted RBP21.53■■□□□ 1.04
VPS37A-211ENST00000521976 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
VPS37A-211ENST00000521976 ADRA2BP18089 450 aa21.45■■□□□ 1.02
VPS37A-211ENST00000521976 POTEDQ86YR6 584 aa20.88■□□□□ 0.93
VPS37A-211ENST00000521976 SCAF1Q9H7N4 1312 aaKnown RBP19.71■□□□□ 0.75
VPS37A-211ENST00000521976 MAPK8IP2Q13387 824 aaPredicted RBP19.68■□□□□ 0.74
VPS37A-211ENST00000521976 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
VPS37A-211ENST00000521976 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
VPS37A-211ENST00000521976 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
VPS37A-211ENST00000521976 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
VPS37A-211ENST00000521976 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
VPS37A-211ENST00000521976 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
VPS37A-211ENST00000521976 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
VPS37A-211ENST00000521976 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
VPS37A-211ENST00000521976 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
VPS37A-211ENST00000521976 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
VPS37A-211ENST00000521976 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
VPS37A-211ENST00000521976 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
VPS37A-211ENST00000521976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.483e-6■■□□□ 13.8
VPS37A-211ENST00000521976 KCNA4P22459 653 aa17.99■□□□□ 0.47
VPS37A-211ENST00000521976 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
VPS37A-211ENST00000521976 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
VPS37A-211ENST00000521976 CAPN15O75808 1086 aa17.36■□□□□ 0.37
VPS37A-211ENST00000521976 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
VPS37A-211ENST00000521976 APLP2Q06481 763 aa17.21■□□□□ 0.35
VPS37A-211ENST00000521976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
VPS37A-211ENST00000521976 DSG3P32926 999 aa17.19■□□□□ 0.34
VPS37A-211ENST00000521976 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
VPS37A-211ENST00000521976 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
VPS37A-211ENST00000521976 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
VPS37A-211ENST00000521976 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
VPS37A-211ENST00000521976 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
VPS37A-211ENST00000521976 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
VPS37A-211ENST00000521976 ABCB7O75027 752 aa16.94■□□□□ 0.3
VPS37A-211ENST00000521976 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
VPS37A-211ENST00000521976 POLA2Q14181 598 aa16.62■□□□□ 0.25
VPS37A-211ENST00000521976 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
VPS37A-211ENST00000521976 ZBTB22O15209 634 aa16.51■□□□□ 0.23
VPS37A-211ENST00000521976 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
VPS37A-211ENST00000521976 POTEHQ6S545 545 aa16.39■□□□□ 0.21
VPS37A-211ENST00000521976 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
VPS37A-211ENST00000521976 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
VPS37A-211ENST00000521976 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
VPS37A-211ENST00000521976 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
VPS37A-211ENST00000521976 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
VPS37A-211ENST00000521976 FBLN2P98095 1184 aa15.96■□□□□ 0.15
VPS37A-211ENST00000521976 REM2Q8IYK8 340 aaPredicted RBP15.9■□□□□ 0.14
VPS37A-211ENST00000521976 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
VPS37A-211ENST00000521976 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
VPS37A-211ENST00000521976 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
VPS37A-211ENST00000521976 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
VPS37A-211ENST00000521976 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
VPS37A-211ENST00000521976 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
VPS37A-211ENST00000521976 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
VPS37A-211ENST00000521976 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
VPS37A-211ENST00000521976 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
VPS37A-211ENST00000521976 FXR2P51116 673 aaKnown RBP eCLIP15.57■□□□□ 0.08
VPS37A-211ENST00000521976 SSUH2Q9Y2M2 353 aa15.56■□□□□ 0.08
VPS37A-211ENST00000521976 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
VPS37A-211ENST00000521976 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
VPS37A-211ENST00000521976 HAX1O00165 279 aa15.4■□□□□ 0.06
VPS37A-211ENST00000521976 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
VPS37A-211ENST00000521976 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
VPS37A-211ENST00000521976 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
VPS37A-211ENST00000521976 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
VPS37A-211ENST00000521976 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
VPS37A-211ENST00000521976 EVX2Q03828 476 aa15.14■□□□□ 0.01
VPS37A-211ENST00000521976 SPDYE4A6NLX3 237 aa15.1■□□□□ 0.01
VPS37A-211ENST00000521976 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
VPS37A-211ENST00000521976 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
VPS37A-211ENST00000521976 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
VPS37A-211ENST00000521976 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
VPS37A-211ENST00000521976 GABBR2O75899 941 aa14.84□□□□□ -0.03
VPS37A-211ENST00000521976 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
VPS37A-211ENST00000521976 PROM2Q8N271 834 aa14.68□□□□□ -0.06
VPS37A-211ENST00000521976 CLCN6P51797 869 aa14.67□□□□□ -0.06
VPS37A-211ENST00000521976 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
VPS37A-211ENST00000521976 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
VPS37A-211ENST00000521976 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
VPS37A-211ENST00000521976 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
VPS37A-211ENST00000521976 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
VPS37A-211ENST00000521976 DCBLD2Q96PD2 775 aa14.51□□□□□ -0.09
VPS37A-211ENST00000521976 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
VPS37A-211ENST00000521976 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
VPS37A-211ENST00000521976 LHX8Q68G74 356 aa14.45□□□□□ -0.1
VPS37A-211ENST00000521976 PHF12Q96QT6 1004 aa14.45□□□□□ -0.1
VPS37A-211ENST00000521976 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
VPS37A-211ENST00000521976 MIER1Q8N108 512 aa14.42□□□□□ -0.1
VPS37A-211ENST00000521976 FKBP8Q14318 412 aa14.4□□□□□ -0.1
VPS37A-211ENST00000521976 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
VPS37A-211ENST00000521976 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
VPS37A-211ENST00000521976 MS4A3Q96HJ5 214 aa14.25□□□□□ -0.13
VPS37A-211ENST00000521976 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms