RNA–Protein interactions for RNA: ENST00000521876.5

MSR1-212, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-212ENST00000521876 AEBP2Q6ZN18 517 aaPredicted RBP22.51■■□□□ 1.19
MSR1-212ENST00000521876 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
MSR1-212ENST00000521876 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
MSR1-212ENST00000521876 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
MSR1-212ENST00000521876 FOXD1Q16676 465 aa18.04■□□□□ 0.48
MSR1-212ENST00000521876 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
MSR1-212ENST00000521876 MSH5O43196 834 aa17.1■□□□□ 0.33
MSR1-212ENST00000521876 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
MSR1-212ENST00000521876 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
MSR1-212ENST00000521876 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
MSR1-212ENST00000521876 ADRA2BP18089 450 aa16.5■□□□□ 0.23
MSR1-212ENST00000521876 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
MSR1-212ENST00000521876 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
MSR1-212ENST00000521876 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
MSR1-212ENST00000521876 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
MSR1-212ENST00000521876 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
MSR1-212ENST00000521876 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
MSR1-212ENST00000521876 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
MSR1-212ENST00000521876 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
MSR1-212ENST00000521876 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
MSR1-212ENST00000521876 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
MSR1-212ENST00000521876 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
MSR1-212ENST00000521876 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
MSR1-212ENST00000521876 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
MSR1-212ENST00000521876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
MSR1-212ENST00000521876 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
MSR1-212ENST00000521876 POTEHQ6S545 545 aa13.52□□□□□ -0.25
MSR1-212ENST00000521876 CAPN15O75808 1086 aa13.51□□□□□ -0.25
MSR1-212ENST00000521876 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
MSR1-212ENST00000521876 DSG3P32926 999 aa13.45□□□□□ -0.26
MSR1-212ENST00000521876 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
MSR1-212ENST00000521876 APLP2Q06481 763 aa13.21□□□□□ -0.29
MSR1-212ENST00000521876 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
MSR1-212ENST00000521876 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
MSR1-212ENST00000521876 ABCB7O75027 752 aa13.13□□□□□ -0.31
MSR1-212ENST00000521876 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
MSR1-212ENST00000521876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
MSR1-212ENST00000521876 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
MSR1-212ENST00000521876 KCNA4P22459 653 aa13.03□□□□□ -0.32
MSR1-212ENST00000521876 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
MSR1-212ENST00000521876 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
MSR1-212ENST00000521876 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
MSR1-212ENST00000521876 POLA2Q14181 598 aa12.73□□□□□ -0.37
MSR1-212ENST00000521876 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
MSR1-212ENST00000521876 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
MSR1-212ENST00000521876 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
MSR1-212ENST00000521876 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
MSR1-212ENST00000521876 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
MSR1-212ENST00000521876 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
MSR1-212ENST00000521876 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
MSR1-212ENST00000521876 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
MSR1-212ENST00000521876 HAX1O00165 279 aa12.3□□□□□ -0.44
MSR1-212ENST00000521876 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
MSR1-212ENST00000521876 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
MSR1-212ENST00000521876 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
MSR1-212ENST00000521876 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
MSR1-212ENST00000521876 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
MSR1-212ENST00000521876 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
MSR1-212ENST00000521876 EVX2Q03828 476 aa12.02□□□□□ -0.49
MSR1-212ENST00000521876 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
MSR1-212ENST00000521876 FBLN2P98095 1184 aa12.01□□□□□ -0.49
MSR1-212ENST00000521876 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
MSR1-212ENST00000521876 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
MSR1-212ENST00000521876 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
MSR1-212ENST00000521876 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
MSR1-212ENST00000521876 ZBTB22O15209 634 aa11.92□□□□□ -0.5
MSR1-212ENST00000521876 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
MSR1-212ENST00000521876 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
MSR1-212ENST00000521876 GABBR2O75899 941 aa11.77□□□□□ -0.53
MSR1-212ENST00000521876 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
MSR1-212ENST00000521876 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
MSR1-212ENST00000521876 LHX8Q68G74 356 aa11.73□□□□□ -0.53
MSR1-212ENST00000521876 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
MSR1-212ENST00000521876 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
MSR1-212ENST00000521876 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSR1-212ENST00000521876 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
MSR1-212ENST00000521876 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
MSR1-212ENST00000521876 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
MSR1-212ENST00000521876 CLCN6P51797 869 aa11.5□□□□□ -0.57
MSR1-212ENST00000521876 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
MSR1-212ENST00000521876 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
MSR1-212ENST00000521876 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
MSR1-212ENST00000521876 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
MSR1-212ENST00000521876 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
MSR1-212ENST00000521876 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
MSR1-212ENST00000521876 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
MSR1-212ENST00000521876 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
MSR1-212ENST00000521876 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
MSR1-212ENST00000521876 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
MSR1-212ENST00000521876 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
MSR1-212ENST00000521876 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
MSR1-212ENST00000521876 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
MSR1-212ENST00000521876 POTEB2H3BUK9 544 aa11.08□□□□□ -0.64
MSR1-212ENST00000521876 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
MSR1-212ENST00000521876 POTEMA6NI47 508 aa11.05□□□□□ -0.64
MSR1-212ENST00000521876 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
MSR1-212ENST00000521876 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
MSR1-212ENST00000521876 METRNQ9UJH8 293 aa10.97□□□□□ -0.65
MSR1-212ENST00000521876 SLC39A7Q92504 469 aa10.96□□□□□ -0.65
MSR1-212ENST00000521876 C7P10643 843 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms