RNA–Protein interactions for RNA: ENST00000521671.1

ATP6V1C1-206, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 3

Gene ATP6V1C1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-206ENST00000521671 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
ATP6V1C1-206ENST00000521671 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
ATP6V1C1-206ENST00000521671 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
ATP6V1C1-206ENST00000521671 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
ATP6V1C1-206ENST00000521671 FOXD1Q16676 465 aa21.75■■□□□ 1.07
ATP6V1C1-206ENST00000521671 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
ATP6V1C1-206ENST00000521671 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
ATP6V1C1-206ENST00000521671 MSH5O43196 834 aa20.39■□□□□ 0.85
ATP6V1C1-206ENST00000521671 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
ATP6V1C1-206ENST00000521671 ADRA2BP18089 450 aa20.34■□□□□ 0.85
ATP6V1C1-206ENST00000521671 POTEDQ86YR6 584 aa19.66■□□□□ 0.74
ATP6V1C1-206ENST00000521671 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
ATP6V1C1-206ENST00000521671 MAPK8IP2Q13387 824 aaPredicted RBP18.63■□□□□ 0.57
ATP6V1C1-206ENST00000521671 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
ATP6V1C1-206ENST00000521671 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
ATP6V1C1-206ENST00000521671 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
ATP6V1C1-206ENST00000521671 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
ATP6V1C1-206ENST00000521671 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
ATP6V1C1-206ENST00000521671 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
ATP6V1C1-206ENST00000521671 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
ATP6V1C1-206ENST00000521671 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
ATP6V1C1-206ENST00000521671 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
ATP6V1C1-206ENST00000521671 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
ATP6V1C1-206ENST00000521671 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
ATP6V1C1-206ENST00000521671 KCNA4P22459 653 aa17.18■□□□□ 0.34
ATP6V1C1-206ENST00000521671 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
ATP6V1C1-206ENST00000521671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATP6V1C1-206ENST00000521671 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
ATP6V1C1-206ENST00000521671 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
ATP6V1C1-206ENST00000521671 CAPN15O75808 1086 aa16.44■□□□□ 0.22
ATP6V1C1-206ENST00000521671 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
ATP6V1C1-206ENST00000521671 APLP2Q06481 763 aa16.35■□□□□ 0.21
ATP6V1C1-206ENST00000521671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
ATP6V1C1-206ENST00000521671 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
ATP6V1C1-206ENST00000521671 DSG3P32926 999 aa16.28■□□□□ 0.2
ATP6V1C1-206ENST00000521671 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
ATP6V1C1-206ENST00000521671 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
ATP6V1C1-206ENST00000521671 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
ATP6V1C1-206ENST00000521671 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
ATP6V1C1-206ENST00000521671 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
ATP6V1C1-206ENST00000521671 ABCB7O75027 752 aa16.05■□□□□ 0.16
ATP6V1C1-206ENST00000521671 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
ATP6V1C1-206ENST00000521671 ZBTB22O15209 634 aa15.77■□□□□ 0.12
ATP6V1C1-206ENST00000521671 POLA2Q14181 598 aa15.76■□□□□ 0.11
ATP6V1C1-206ENST00000521671 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
ATP6V1C1-206ENST00000521671 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
ATP6V1C1-206ENST00000521671 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
ATP6V1C1-206ENST00000521671 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
ATP6V1C1-206ENST00000521671 POTEHQ6S545 545 aa15.45■□□□□ 0.06
ATP6V1C1-206ENST00000521671 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
ATP6V1C1-206ENST00000521671 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
ATP6V1C1-206ENST00000521671 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
ATP6V1C1-206ENST00000521671 FBLN2P98095 1184 aa15.17■□□□□ 0.02
ATP6V1C1-206ENST00000521671 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
ATP6V1C1-206ENST00000521671 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
ATP6V1C1-206ENST00000521671 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
ATP6V1C1-206ENST00000521671 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
ATP6V1C1-206ENST00000521671 SPDYE6P0CI01 402 aa15.02■□□□□ -0
ATP6V1C1-206ENST00000521671 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
ATP6V1C1-206ENST00000521671 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
ATP6V1C1-206ENST00000521671 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
ATP6V1C1-206ENST00000521671 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
ATP6V1C1-206ENST00000521671 PIP4P2Q8N4L2 257 aa14.82□□□□□ -0.04
ATP6V1C1-206ENST00000521671 SSUH2Q9Y2M2 353 aa14.81□□□□□ -0.04
ATP6V1C1-206ENST00000521671 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.05
ATP6V1C1-206ENST00000521671 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
ATP6V1C1-206ENST00000521671 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
ATP6V1C1-206ENST00000521671 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
ATP6V1C1-206ENST00000521671 HAX1O00165 279 aa14.54□□□□□ -0.08
ATP6V1C1-206ENST00000521671 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
ATP6V1C1-206ENST00000521671 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
ATP6V1C1-206ENST00000521671 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
ATP6V1C1-206ENST00000521671 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
ATP6V1C1-206ENST00000521671 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
ATP6V1C1-206ENST00000521671 EVX2Q03828 476 aa14.3□□□□□ -0.12
ATP6V1C1-206ENST00000521671 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
ATP6V1C1-206ENST00000521671 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
ATP6V1C1-206ENST00000521671 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
ATP6V1C1-206ENST00000521671 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
ATP6V1C1-206ENST00000521671 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
ATP6V1C1-206ENST00000521671 GABBR2O75899 941 aa14.03□□□□□ -0.16
ATP6V1C1-206ENST00000521671 PROM2Q8N271 834 aa14.03□□□□□ -0.16
ATP6V1C1-206ENST00000521671 CLCN6P51797 869 aa13.91□□□□□ -0.18
ATP6V1C1-206ENST00000521671 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
ATP6V1C1-206ENST00000521671 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
ATP6V1C1-206ENST00000521671 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
ATP6V1C1-206ENST00000521671 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
ATP6V1C1-206ENST00000521671 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
ATP6V1C1-206ENST00000521671 FKBP8Q14318 412 aa13.77□□□□□ -0.21
ATP6V1C1-206ENST00000521671 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
ATP6V1C1-206ENST00000521671 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
ATP6V1C1-206ENST00000521671 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
ATP6V1C1-206ENST00000521671 MIER1Q8N108 512 aa13.71□□□□□ -0.21
ATP6V1C1-206ENST00000521671 PHF12Q96QT6 1004 aa13.7□□□□□ -0.22
ATP6V1C1-206ENST00000521671 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
ATP6V1C1-206ENST00000521671 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
ATP6V1C1-206ENST00000521671 LHX8Q68G74 356 aa13.63□□□□□ -0.23
ATP6V1C1-206ENST00000521671 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
ATP6V1C1-206ENST00000521671 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
ATP6V1C1-206ENST00000521671 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms