RNA–Protein interactions for RNA: ENST00000521520.1

GABRA6-205, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

TSL 2

Gene GABRA6, Length 2,175 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-205ENST00000521520 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
GABRA6-205ENST00000521520 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
GABRA6-205ENST00000521520 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
GABRA6-205ENST00000521520 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
GABRA6-205ENST00000521520 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
GABRA6-205ENST00000521520 FOXD1Q16676 465 aa12.46□□□□□ -0.41
GABRA6-205ENST00000521520 ADRA2BP18089 450 aa12.37□□□□□ -0.43
GABRA6-205ENST00000521520 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
GABRA6-205ENST00000521520 KCNA4P22459 653 aa11.85□□□□□ -0.51
GABRA6-205ENST00000521520 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
GABRA6-205ENST00000521520 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
GABRA6-205ENST00000521520 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
GABRA6-205ENST00000521520 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
GABRA6-205ENST00000521520 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
GABRA6-205ENST00000521520 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
GABRA6-205ENST00000521520 MSH5O43196 834 aa11.24□□□□□ -0.61
GABRA6-205ENST00000521520 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
GABRA6-205ENST00000521520 CNKSR2Q8WXI2 1034 aa11.17□□□□□ -0.62
GABRA6-205ENST00000521520 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
GABRA6-205ENST00000521520 MAPK8IP2Q13387 824 aaPredicted RBP11.1□□□□□ -0.63
GABRA6-205ENST00000521520 ZBTB22O15209 634 aa10.95□□□□□ -0.66
GABRA6-205ENST00000521520 RNF216Q9NWF9 866 aaPredicted RBP10.86□□□□□ -0.67
GABRA6-205ENST00000521520 DNAJC5BQ9UF47 199 aa10.83□□□□□ -0.68
GABRA6-205ENST00000521520 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
GABRA6-205ENST00000521520 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
GABRA6-205ENST00000521520 FOXD4L1Q9NU39 408 aa10.72□□□□□ -0.69
GABRA6-205ENST00000521520 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
GABRA6-205ENST00000521520 MYCNP04198 464 aaPredicted RBP10.36□□□□□ -0.75
GABRA6-205ENST00000521520 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
GABRA6-205ENST00000521520 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
GABRA6-205ENST00000521520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.2□□□□□ -0.78
GABRA6-205ENST00000521520 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
GABRA6-205ENST00000521520 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
GABRA6-205ENST00000521520 FKBP8Q14318 412 aa10.05□□□□□ -0.8
GABRA6-205ENST00000521520 SAMD1Q6SPF0 538 aaPredicted RBP10.04□□□□□ -0.8
GABRA6-205ENST00000521520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.8
GABRA6-205ENST00000521520 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.8
GABRA6-205ENST00000521520 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.83
GABRA6-205ENST00000521520 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
GABRA6-205ENST00000521520 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
GABRA6-205ENST00000521520 APLP2Q06481 763 aa9.78□□□□□ -0.84
GABRA6-205ENST00000521520 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
GABRA6-205ENST00000521520 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
GABRA6-205ENST00000521520 MKRN4PQ13434 485 aaPredicted RBP9.72□□□□□ -0.85
GABRA6-205ENST00000521520 TRHP20396 242 aaPredicted RBP9.7□□□□□ -0.86
GABRA6-205ENST00000521520 POLA2Q14181 598 aa9.65□□□□□ -0.86
GABRA6-205ENST00000521520 SPDYE4A6NLX3 237 aa9.64□□□□□ -0.87
GABRA6-205ENST00000521520 CAPN15O75808 1086 aa9.64□□□□□ -0.87
GABRA6-205ENST00000521520 POTEDQ86YR6 584 aa9.62□□□□□ -0.87
GABRA6-205ENST00000521520 C1QBPQ07021 282 aaKnown RBP9.59□□□□□ -0.87
GABRA6-205ENST00000521520 FBLN2P98095 1184 aa9.57□□□□□ -0.88
GABRA6-205ENST00000521520 PROM2Q8N271 834 aa9.55□□□□□ -0.88
GABRA6-205ENST00000521520 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
GABRA6-205ENST00000521520 ABCB7O75027 752 aa9.53□□□□□ -0.88
GABRA6-205ENST00000521520 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
GABRA6-205ENST00000521520 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
GABRA6-205ENST00000521520 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
GABRA6-205ENST00000521520 DSG3P32926 999 aa9.41□□□□□ -0.9
GABRA6-205ENST00000521520 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
GABRA6-205ENST00000521520 OSCARQ8IYS5 282 aa9.32□□□□□ -0.92
GABRA6-205ENST00000521520 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
GABRA6-205ENST00000521520 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
GABRA6-205ENST00000521520 SPDYE2BA6NHP3 402 aa9.24□□□□□ -0.93
GABRA6-205ENST00000521520 SPDYE6P0CI01 402 aa9.24□□□□□ -0.93
GABRA6-205ENST00000521520 SPDYE2Q495Y8 402 aa9.24□□□□□ -0.93
GABRA6-205ENST00000521520 PKD2Q13563 968 aa9.22□□□□□ -0.93
GABRA6-205ENST00000521520 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
GABRA6-205ENST00000521520 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
GABRA6-205ENST00000521520 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
GABRA6-205ENST00000521520 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
GABRA6-205ENST00000521520 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
GABRA6-205ENST00000521520 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
GABRA6-205ENST00000521520 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
GABRA6-205ENST00000521520 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
GABRA6-205ENST00000521520 MIER1Q8N108 512 aa9.08□□□□□ -0.96
GABRA6-205ENST00000521520 ECM2O94769 699 aaPredicted RBP9.03□□□□□ -0.96
GABRA6-205ENST00000521520 RGL2O15211 777 aa8.98□□□□□ -0.97
GABRA6-205ENST00000521520 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
GABRA6-205ENST00000521520 HAP1P54257 671 aaPredicted RBP8.95□□□□□ -0.98
GABRA6-205ENST00000521520 CIZ1Q9ULV3 898 aaPredicted RBP8.93□□□□□ -0.98
GABRA6-205ENST00000521520 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
GABRA6-205ENST00000521520 ZBTB47Q9UFB7 747 aaPredicted RBP8.92□□□□□ -0.98
GABRA6-205ENST00000521520 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
GABRA6-205ENST00000521520 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
GABRA6-205ENST00000521520 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
GABRA6-205ENST00000521520 RBM42Q9BTD8 480 aaKnown RBP8.86□□□□□ -0.99
GABRA6-205ENST00000521520 PAXIP1Q6ZW49 1069 aaPredicted RBP8.85□□□□□ -0.99
GABRA6-205ENST00000521520 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.85□□□□□ -0.99
GABRA6-205ENST00000521520 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
GABRA6-205ENST00000521520 NUBP1P53384 320 aa8.84□□□□□ -0.99
GABRA6-205ENST00000521520 REM2Q8IYK8 340 aaPredicted RBP8.83□□□□□ -1
GABRA6-205ENST00000521520 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
GABRA6-205ENST00000521520 CREBZFQ9NS37 354 aa8.82□□□□□ -1
GABRA6-205ENST00000521520 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
GABRA6-205ENST00000521520 CFAP44Q96MT7 982 aa8.82□□□□□ -1
GABRA6-205ENST00000521520 MNX1P50219 401 aaPredicted RBP8.81□□□□□ -1
GABRA6-205ENST00000521520 PRR29P0C7W0 189 aa8.8□□□□□ -1
GABRA6-205ENST00000521520 VSIG10Q8N0Z9 540 aa8.79□□□□□ -1
GABRA6-205ENST00000521520 KDM2AQ9Y2K7 1162 aa8.79□□□□□ -1
GABRA6-205ENST00000521520 TRIM41Q8WV44 630 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms