RNA–Protein interactions for RNA: ENST00000521461.5

KHDRBS3-207, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

TSL 5

Gene KHDRBS3, Length 793 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-207ENST00000521461 AEBP2Q6ZN18 517 aaPredicted RBP28.18■■■□□ 2.1
KHDRBS3-207ENST00000521461 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
KHDRBS3-207ENST00000521461 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
KHDRBS3-207ENST00000521461 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
KHDRBS3-207ENST00000521461 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
KHDRBS3-207ENST00000521461 FOXD1Q16676 465 aa22.16■■□□□ 1.14
KHDRBS3-207ENST00000521461 ADRA2BP18089 450 aa21.42■■□□□ 1.02
KHDRBS3-207ENST00000521461 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
KHDRBS3-207ENST00000521461 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
KHDRBS3-207ENST00000521461 MSH5O43196 834 aa20.39■□□□□ 0.85
KHDRBS3-207ENST00000521461 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
KHDRBS3-207ENST00000521461 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
KHDRBS3-207ENST00000521461 KCNA4P22459 653 aa19.55■□□□□ 0.72
KHDRBS3-207ENST00000521461 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
KHDRBS3-207ENST00000521461 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
KHDRBS3-207ENST00000521461 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
KHDRBS3-207ENST00000521461 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
KHDRBS3-207ENST00000521461 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
KHDRBS3-207ENST00000521461 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
KHDRBS3-207ENST00000521461 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
KHDRBS3-207ENST00000521461 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
KHDRBS3-207ENST00000521461 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
KHDRBS3-207ENST00000521461 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
KHDRBS3-207ENST00000521461 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
KHDRBS3-207ENST00000521461 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
KHDRBS3-207ENST00000521461 SLC4A2P04920 1241 aa18■□□□□ 0.47
KHDRBS3-207ENST00000521461 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
KHDRBS3-207ENST00000521461 ZBTB22O15209 634 aa17.99■□□□□ 0.47
KHDRBS3-207ENST00000521461 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
KHDRBS3-207ENST00000521461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
KHDRBS3-207ENST00000521461 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
KHDRBS3-207ENST00000521461 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
KHDRBS3-207ENST00000521461 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
KHDRBS3-207ENST00000521461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
KHDRBS3-207ENST00000521461 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
KHDRBS3-207ENST00000521461 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
KHDRBS3-207ENST00000521461 ATXN8OSP0DMR3 200 aa17.33■□□□□ 0.36
KHDRBS3-207ENST00000521461 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
KHDRBS3-207ENST00000521461 APLP2Q06481 763 aa17.23■□□□□ 0.35
KHDRBS3-207ENST00000521461 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
KHDRBS3-207ENST00000521461 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
KHDRBS3-207ENST00000521461 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
KHDRBS3-207ENST00000521461 CAPN15O75808 1086 aa17■□□□□ 0.31
KHDRBS3-207ENST00000521461 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
KHDRBS3-207ENST00000521461 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
KHDRBS3-207ENST00000521461 POLA2Q14181 598 aa16.71■□□□□ 0.27
KHDRBS3-207ENST00000521461 ABCB7O75027 752 aa16.69■□□□□ 0.26
KHDRBS3-207ENST00000521461 DSG3P32926 999 aa16.68■□□□□ 0.26
KHDRBS3-207ENST00000521461 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
KHDRBS3-207ENST00000521461 FBLN2P98095 1184 aa16.44■□□□□ 0.22
KHDRBS3-207ENST00000521461 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
KHDRBS3-207ENST00000521461 FKBP8Q14318 412 aa16.27■□□□□ 0.2
KHDRBS3-207ENST00000521461 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
KHDRBS3-207ENST00000521461 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
KHDRBS3-207ENST00000521461 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
KHDRBS3-207ENST00000521461 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
KHDRBS3-207ENST00000521461 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
KHDRBS3-207ENST00000521461 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
KHDRBS3-207ENST00000521461 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
KHDRBS3-207ENST00000521461 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
KHDRBS3-207ENST00000521461 PROM2Q8N271 834 aa15.88■□□□□ 0.13
KHDRBS3-207ENST00000521461 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
KHDRBS3-207ENST00000521461 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
KHDRBS3-207ENST00000521461 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
KHDRBS3-207ENST00000521461 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
KHDRBS3-207ENST00000521461 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
KHDRBS3-207ENST00000521461 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
KHDRBS3-207ENST00000521461 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
KHDRBS3-207ENST00000521461 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
KHDRBS3-207ENST00000521461 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
KHDRBS3-207ENST00000521461 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
KHDRBS3-207ENST00000521461 MIER1Q8N108 512 aa15.28■□□□□ 0.04
KHDRBS3-207ENST00000521461 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
KHDRBS3-207ENST00000521461 IFNLR1Q8IU57 520 aaPredicted RBP15.24■□□□□ 0.03
KHDRBS3-207ENST00000521461 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
KHDRBS3-207ENST00000521461 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
KHDRBS3-207ENST00000521461 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
KHDRBS3-207ENST00000521461 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
KHDRBS3-207ENST00000521461 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
KHDRBS3-207ENST00000521461 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
KHDRBS3-207ENST00000521461 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
KHDRBS3-207ENST00000521461 POTEHQ6S545 545 aa15.05■□□□□ -0
KHDRBS3-207ENST00000521461 CHADLQ6NUI6 762 aa15.04■□□□□ -0
KHDRBS3-207ENST00000521461 SPOCK2Q92563 424 aa15.04■□□□□ -0
KHDRBS3-207ENST00000521461 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
KHDRBS3-207ENST00000521461 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
KHDRBS3-207ENST00000521461 RTN4Q9NQC3 1192 aaKnown RBP15.02■□□□□ -0
KHDRBS3-207ENST00000521461 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
KHDRBS3-207ENST00000521461 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
KHDRBS3-207ENST00000521461 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
KHDRBS3-207ENST00000521461 NUBP1P53384 320 aa14.87□□□□□ -0.03
KHDRBS3-207ENST00000521461 CIZ1Q9ULV3 898 aaPredicted RBP14.79□□□□□ -0.04
KHDRBS3-207ENST00000521461 PKD2Q13563 968 aa14.78□□□□□ -0.04
KHDRBS3-207ENST00000521461 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
KHDRBS3-207ENST00000521461 GSE1Q14687 1217 aa14.76□□□□□ -0.05
KHDRBS3-207ENST00000521461 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
KHDRBS3-207ENST00000521461 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
KHDRBS3-207ENST00000521461 ECM2O94769 699 aaPredicted RBP14.67□□□□□ -0.06
KHDRBS3-207ENST00000521461 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
KHDRBS3-207ENST00000521461 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms