RNA–Protein interactions for RNA: ENST00000521220.1

CCDC25-208, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-208ENST00000521220 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
CCDC25-208ENST00000521220 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
CCDC25-208ENST00000521220 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
CCDC25-208ENST00000521220 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
CCDC25-208ENST00000521220 FOXD1Q16676 465 aa21.38■■□□□ 1.01
CCDC25-208ENST00000521220 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
CCDC25-208ENST00000521220 MSH5O43196 834 aa20.1■□□□□ 0.81
CCDC25-208ENST00000521220 PIAS4Q8N2W9 510 aaPredicted RBP20.02■□□□□ 0.8
CCDC25-208ENST00000521220 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
CCDC25-208ENST00000521220 ADRA2BP18089 450 aa19.9■□□□□ 0.78
CCDC25-208ENST00000521220 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
CCDC25-208ENST00000521220 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
CCDC25-208ENST00000521220 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
CCDC25-208ENST00000521220 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CCDC25-208ENST00000521220 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
CCDC25-208ENST00000521220 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
CCDC25-208ENST00000521220 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
CCDC25-208ENST00000521220 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
CCDC25-208ENST00000521220 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
CCDC25-208ENST00000521220 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
CCDC25-208ENST00000521220 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
CCDC25-208ENST00000521220 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
CCDC25-208ENST00000521220 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
CCDC25-208ENST00000521220 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
CCDC25-208ENST00000521220 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
CCDC25-208ENST00000521220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCDC25-208ENST00000521220 KCNA4P22459 653 aa16.68■□□□□ 0.26
CCDC25-208ENST00000521220 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
CCDC25-208ENST00000521220 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
CCDC25-208ENST00000521220 CAPN15O75808 1086 aa16.09■□□□□ 0.17
CCDC25-208ENST00000521220 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
CCDC25-208ENST00000521220 APLP2Q06481 763 aa16.05■□□□□ 0.16
CCDC25-208ENST00000521220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
CCDC25-208ENST00000521220 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.16
CCDC25-208ENST00000521220 DSG3P32926 999 aa16.01■□□□□ 0.15
CCDC25-208ENST00000521220 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
CCDC25-208ENST00000521220 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
CCDC25-208ENST00000521220 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
CCDC25-208ENST00000521220 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
CCDC25-208ENST00000521220 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
CCDC25-208ENST00000521220 ABCB7O75027 752 aa15.69■□□□□ 0.1
CCDC25-208ENST00000521220 FOXD4L1Q9NU39 408 aa15.62■□□□□ 0.09
CCDC25-208ENST00000521220 POLA2Q14181 598 aa15.41■□□□□ 0.06
CCDC25-208ENST00000521220 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
CCDC25-208ENST00000521220 ZBTB22O15209 634 aa15.31■□□□□ 0.04
CCDC25-208ENST00000521220 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
CCDC25-208ENST00000521220 POTEHQ6S545 545 aa15.29■□□□□ 0.04
CCDC25-208ENST00000521220 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
CCDC25-208ENST00000521220 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
CCDC25-208ENST00000521220 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
CCDC25-208ENST00000521220 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
CCDC25-208ENST00000521220 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CCDC25-208ENST00000521220 FBLN2P98095 1184 aa14.82□□□□□ -0.04
CCDC25-208ENST00000521220 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
CCDC25-208ENST00000521220 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
CCDC25-208ENST00000521220 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
CCDC25-208ENST00000521220 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
CCDC25-208ENST00000521220 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
CCDC25-208ENST00000521220 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
CCDC25-208ENST00000521220 CSRNP3Q8WYN3 585 aa14.64□□□□□ -0.07
CCDC25-208ENST00000521220 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
CCDC25-208ENST00000521220 FXR2P51116 673 aaKnown RBP eCLIP14.52□□□□□ -0.09
CCDC25-208ENST00000521220 SSUH2Q9Y2M2 353 aa14.52□□□□□ -0.09
CCDC25-208ENST00000521220 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
CCDC25-208ENST00000521220 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.09
CCDC25-208ENST00000521220 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
CCDC25-208ENST00000521220 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
CCDC25-208ENST00000521220 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
CCDC25-208ENST00000521220 HAX1O00165 279 aa14.28□□□□□ -0.12
CCDC25-208ENST00000521220 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC25-208ENST00000521220 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
CCDC25-208ENST00000521220 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
CCDC25-208ENST00000521220 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
CCDC25-208ENST00000521220 EVX2Q03828 476 aa14.04□□□□□ -0.16
CCDC25-208ENST00000521220 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
CCDC25-208ENST00000521220 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
CCDC25-208ENST00000521220 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
CCDC25-208ENST00000521220 FARP1Q9Y4F1 1045 aaPredicted RBP13.9□□□□□ -0.18
CCDC25-208ENST00000521220 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
CCDC25-208ENST00000521220 GABBR2O75899 941 aa13.8□□□□□ -0.2
CCDC25-208ENST00000521220 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
CCDC25-208ENST00000521220 CLCN6P51797 869 aa13.74□□□□□ -0.21
CCDC25-208ENST00000521220 PROM2Q8N271 834 aa13.71□□□□□ -0.21
CCDC25-208ENST00000521220 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
CCDC25-208ENST00000521220 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
CCDC25-208ENST00000521220 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC25-208ENST00000521220 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
CCDC25-208ENST00000521220 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
CCDC25-208ENST00000521220 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
CCDC25-208ENST00000521220 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
CCDC25-208ENST00000521220 LHX8Q68G74 356 aa13.44□□□□□ -0.26
CCDC25-208ENST00000521220 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
CCDC25-208ENST00000521220 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
CCDC25-208ENST00000521220 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CCDC25-208ENST00000521220 MIER1Q8N108 512 aa13.31□□□□□ -0.28
CCDC25-208ENST00000521220 FKBP8Q14318 412 aa13.29□□□□□ -0.28
CCDC25-208ENST00000521220 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
CCDC25-208ENST00000521220 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
CCDC25-208ENST00000521220 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
CCDC25-208ENST00000521220 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms