RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
TVP23C-206ENST00000521179 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
TVP23C-206ENST00000521179 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
TVP23C-206ENST00000521179 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
TVP23C-206ENST00000521179 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
TVP23C-206ENST00000521179 FOXD1Q16676 465 aa22.48■■□□□ 1.19
TVP23C-206ENST00000521179 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
TVP23C-206ENST00000521179 ADRA2BP18089 450 aa21.66■■□□□ 1.06
TVP23C-206ENST00000521179 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
TVP23C-206ENST00000521179 MSH5O43196 834 aa20.7■□□□□ 0.9
TVP23C-206ENST00000521179 PPP4R3CPQ6ZMV5 832 aa20.05■□□□□ 0.8
TVP23C-206ENST00000521179 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
TVP23C-206ENST00000521179 KCNA4P22459 653 aa19.65■□□□□ 0.74
TVP23C-206ENST00000521179 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
TVP23C-206ENST00000521179 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
TVP23C-206ENST00000521179 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
TVP23C-206ENST00000521179 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
TVP23C-206ENST00000521179 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
TVP23C-206ENST00000521179 RNF216Q9NWF9 866 aaPredicted RBP19.09■□□□□ 0.65
TVP23C-206ENST00000521179 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
TVP23C-206ENST00000521179 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
TVP23C-206ENST00000521179 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
TVP23C-206ENST00000521179 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
TVP23C-206ENST00000521179 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
TVP23C-206ENST00000521179 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
TVP23C-206ENST00000521179 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
TVP23C-206ENST00000521179 ZBTB22O15209 634 aa18.08■□□□□ 0.48
TVP23C-206ENST00000521179 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
TVP23C-206ENST00000521179 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
TVP23C-206ENST00000521179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.481e-7■□□□□ 8.3
TVP23C-206ENST00000521179 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
TVP23C-206ENST00000521179 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
TVP23C-206ENST00000521179 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
TVP23C-206ENST00000521179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
TVP23C-206ENST00000521179 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
TVP23C-206ENST00000521179 C1QBPQ07021 282 aaKnown RBP17.56■□□□□ 0.4
TVP23C-206ENST00000521179 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
TVP23C-206ENST00000521179 ATXN8OSP0DMR3 200 aa17.48■□□□□ 0.39
TVP23C-206ENST00000521179 APLP2Q06481 763 aa17.4■□□□□ 0.38
TVP23C-206ENST00000521179 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
TVP23C-206ENST00000521179 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
TVP23C-206ENST00000521179 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
TVP23C-206ENST00000521179 CAPN15O75808 1086 aa17.17■□□□□ 0.34
TVP23C-206ENST00000521179 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
TVP23C-206ENST00000521179 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
TVP23C-206ENST00000521179 DSG3P32926 999 aa16.92■□□□□ 0.3
TVP23C-206ENST00000521179 POLA2Q14181 598 aa16.88■□□□□ 0.29
TVP23C-206ENST00000521179 ABCB7O75027 752 aa16.83■□□□□ 0.28
TVP23C-206ENST00000521179 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
TVP23C-206ENST00000521179 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-206ENST00000521179 FBLN2P98095 1184 aa16.56■□□□□ 0.24
TVP23C-206ENST00000521179 FKBP8Q14318 412 aa16.27■□□□□ 0.2
TVP23C-206ENST00000521179 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
TVP23C-206ENST00000521179 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
TVP23C-206ENST00000521179 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
TVP23C-206ENST00000521179 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
TVP23C-206ENST00000521179 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
TVP23C-206ENST00000521179 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
TVP23C-206ENST00000521179 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
TVP23C-206ENST00000521179 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
TVP23C-206ENST00000521179 PROM2Q8N271 834 aa16.01■□□□□ 0.15
TVP23C-206ENST00000521179 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
TVP23C-206ENST00000521179 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
TVP23C-206ENST00000521179 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
TVP23C-206ENST00000521179 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
TVP23C-206ENST00000521179 SPDYE1Q8NFV5 336 aaPredicted RBP15.67■□□□□ 0.1
TVP23C-206ENST00000521179 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
TVP23C-206ENST00000521179 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
TVP23C-206ENST00000521179 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
TVP23C-206ENST00000521179 VASPP50552 380 aaPredicted RBP15.48■□□□□ 0.07
TVP23C-206ENST00000521179 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
TVP23C-206ENST00000521179 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
TVP23C-206ENST00000521179 MIER1Q8N108 512 aa15.36■□□□□ 0.05
TVP23C-206ENST00000521179 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
TVP23C-206ENST00000521179 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
TVP23C-206ENST00000521179 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
TVP23C-206ENST00000521179 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
TVP23C-206ENST00000521179 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
TVP23C-206ENST00000521179 PIP4P2Q8N4L2 257 aa15.22■□□□□ 0.03
TVP23C-206ENST00000521179 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
TVP23C-206ENST00000521179 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
TVP23C-206ENST00000521179 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
TVP23C-206ENST00000521179 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
TVP23C-206ENST00000521179 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
TVP23C-206ENST00000521179 SPOCK2Q92563 424 aa15.09■□□□□ 0.01
TVP23C-206ENST00000521179 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
TVP23C-206ENST00000521179 NPM1P06748 294 aaKnown RBP eCLIP15.03■□□□□ -0
TVP23C-206ENST00000521179 NUBP1P53384 320 aa15□□□□□ -0.01
TVP23C-206ENST00000521179 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
TVP23C-206ENST00000521179 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
TVP23C-206ENST00000521179 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
TVP23C-206ENST00000521179 GSE1Q14687 1217 aa14.83□□□□□ -0.04
TVP23C-206ENST00000521179 POTEHQ6S545 545 aa14.83□□□□□ -0.04
TVP23C-206ENST00000521179 FAM212AQ96EL1 285 aa14.83□□□□□ -0.04
TVP23C-206ENST00000521179 DCAF8Q5TAQ9 597 aa14.82□□□□□ -0.04
TVP23C-206ENST00000521179 PKD2Q13563 968 aa14.81□□□□□ -0.04
TVP23C-206ENST00000521179 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
TVP23C-206ENST00000521179 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
TVP23C-206ENST00000521179 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
TVP23C-206ENST00000521179 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms